Analysis of interatomic Contacts of Structural Units in PDB entry:
7B0A

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7B0A entry

There are 4 chains in PDB entry 7B0A (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 668	THR 1101
B	THR 27	GLU 381
D	THR 668	THR 1101
G	THR 27	GLU 381

There are 18 helices in PDB entry 7B0A. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	922	928	Right-handed alpha
Helix 2	2	A	930	932	Right-handed 310
Helix 3	3	A	1096	1098	Right-handed 310
Helix 4	4	B	56	61	Right-handed 310
Helix 5	5	B	75	77	Right-handed 310
Helix 6	6	B	127	130	Right-handed alpha
Helix 7	7	B	156	161	Right-handed 310
Helix 8	8	B	233	241	Right-handed alpha
Helix 9	9	B	274	285	Right-handed alpha
Helix 10	10	D	922	928	Right-handed alpha
Helix 11	11	D	930	932	Right-handed 310
Helix 12	12	D	1096	1098	Right-handed 310
Helix 13	13	G	56	61	Right-handed 310
Helix 14	14	G	75	77	Right-handed 310
Helix 15	15	G	127	130	Right-handed alpha
Helix 16	16	G	156	161	Right-handed 310
Helix 17	17	G	233	241	Right-handed alpha
Helix 18	18	G	274	285	Right-handed alpha

There are 34 sheets in PDB entry 7B0A. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	676	678	first strand
Strand 2	A	695	702	parallel
Strand 3	A	710	717	anti-parallel
Strand 4	A	813	819	anti-parallel
Strand 5	A	822	828	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	683	689	first strand
Strand 2	A	958	965	anti-parallel
Strand 3	A	839	847	anti-parallel
Strand 4	A	833	835	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	694	697	first strand
Strand 2	A	1085	1088	parallel

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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	947	950	first strand
Strand 2	A	721	728	anti-parallel
Strand 3	A	802	812	anti-parallel
Strand 4	A	855	858	anti-parallel
Strand 5	A	866	869	anti-parallel
Strand 6	A	934	936	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	736	744	first strand
Strand 2	A	787	795	anti-parallel
Strand 3	A	761	768	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	899	904	first strand
Strand 2	A	912	917	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	980	982	first strand
Strand 2	A	998	1007	anti-parallel
Strand 3	A	1035	1043	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1027	1033	first strand
Strand 2	A	1011	1019	anti-parallel
Strand 3	A	1053	1055	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	730	734	first strand
Strand 2	A	798	803	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	985	990	first strand
Strand 2	A	998	1002	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	34	first strand
Strand 2	B	172	180	parallel
Strand 3	B	164	169	anti-parallel
Strand 4	B	64	66	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	50	first strand
Strand 2	B	146	155	anti-parallel
Strand 3	B	134	141	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	89	first strand
Strand 2	B	104	114	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	189	first strand
Strand 2	B	192	194	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	369	378	first strand
Strand 2	B	210	222	anti-parallel
Strand 3	B	253	259	anti-parallel
Strand 4	B	266	268	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	354	first strand
Strand 2	B	321	327	anti-parallel
Strand 3	B	303	310	anti-parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	348	first strand
Strand 2	B	335	338	anti-parallel
Strand 3	B	365	367	anti-parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	676	678	first strand
Strand 2	D	695	702	parallel
Strand 3	D	710	717	anti-parallel
Strand 4	D	813	819	anti-parallel
Strand 5	D	822	828	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	683	689	first strand
Strand 2	D	958	965	anti-parallel
Strand 3	D	839	847	anti-parallel
Strand 4	D	833	835	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	694	697	first strand
Strand 2	D	1085	1088	parallel

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There are 6 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	947	950	first strand
Strand 2	D	721	728	anti-parallel
Strand 3	D	802	812	anti-parallel
Strand 4	D	855	858	anti-parallel
Strand 5	D	866	869	anti-parallel
Strand 6	D	934	936	anti-parallel

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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	736	744	first strand
Strand 2	D	787	795	anti-parallel
Strand 3	D	761	768	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	899	904	first strand
Strand 2	D	912	917	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	980	982	first strand
Strand 2	D	998	1007	anti-parallel
Strand 3	D	1035	1043	anti-parallel

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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1027	1033	first strand
Strand 2	D	1011	1019	anti-parallel
Strand 3	D	1053	1055	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	730	734	first strand
Strand 2	D	798	803	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	985	990	first strand
Strand 2	D	998	1002	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	28	34	first strand
Strand 2	G	172	180	parallel
Strand 3	G	164	169	anti-parallel
Strand 4	G	64	66	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	44	50	first strand
Strand 2	G	146	155	anti-parallel
Strand 3	G	134	141	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	79	89	first strand
Strand 2	G	104	114	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	187	189	first strand
Strand 2	G	192	194	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	369	378	first strand
Strand 2	G	210	222	anti-parallel
Strand 3	G	253	259	anti-parallel
Strand 4	G	266	268	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	352	354	first strand
Strand 2	G	321	327	anti-parallel
Strand 3	G	303	310	anti-parallel

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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	346	348	first strand
Strand 2	G	335	338	anti-parallel
Strand 3	G	365	367	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7B0A

Analysis of interatomic Contacts of Structural Units in PDB entry:
7B0A