Analysis of interatomic Contacts of Structural Units in PDB entry:
7B0E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B0E entry

There is 1 chain in PDB entry 7B0E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7B0E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 41Right-handed alpha
Helix 2
AA2
A
52 64Right-handed alpha
Helix 3
AA3
A
65 66Right-handed 310
Helix 4
AA4
A
67 71Right-handed 310
Helix 5
AA5
A
80 84Right-handed 310
Helix 6
AA6
A
85 96Right-handed alpha
Helix 7
AA7
A
96 101Right-handed alpha
Helix 8
AA8
A
119 132Right-handed alpha
Helix 9
AA9
A
147 152Right-handed alpha
Helix 10
AB1
A
168 181Right-handed alpha
Helix 11
AB2
A
192 219Right-handed 310
Helix 12
AB3
A
223 228Right-handed alpha
Helix 13
AB4
A
232 243Right-handed alpha
Helix 14
AB5
A
256 268Right-handed alpha
Helix 15
AB6
A
272 288Right-handed alpha
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There are 2 sheets in PDB entry 7B0E. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
12 14anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 21first strand
Strand 2
A
45 49parallel
Strand 3
A
72 76parallel
Strand 4
A
107 111parallel
Strand 5
A
138 141parallel
Strand 6
A
156 162parallel
Strand 7
A
184 188parallel
Strand 8
A
249 253parallel
Strand 9
A
16 21parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il