Analysis of interatomic Contacts of Structural Units in PDB entry:
7B0H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7B0H entry

There are 5 chains in PDB entry 7B0H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	A -2	G 10
C	A -2	G 10
D	C 7	T 12
E	MET 1	LEU 755
F	MET 1	ASP 421

There are 51 helices in PDB entry 7B0H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	44	46	Right-handed 310
Helix 2	AA2	E	47	53	Right-handed alpha
Helix 3	AA3	E	91	102	Right-handed alpha
Helix 4	AA4	E	115	124	Right-handed alpha
Helix 5	AA5	E	186	202	Right-handed alpha
Helix 6	AA6	E	214	227	Right-handed alpha
Helix 7	AA7	E	260	268	Right-handed alpha
Helix 8	AA8	E	274	284	Right-handed alpha
Helix 9	AA9	E	291	302	Right-handed alpha
Helix 10	AB1	E	304	338	Right-handed alpha
Helix 11	AB2	E	340	347	Right-handed alpha
Helix 12	AB3	E	348	364	Right-handed alpha
Helix 13	AB4	E	373	380	Right-handed alpha
Helix 14	AB5	E	407	417	Right-handed alpha
Helix 15	AB6	E	449	469	Right-handed alpha
Helix 16	AB7	E	472	498	Right-handed alpha
Helix 17	AB8	E	506	533	Right-handed alpha
Helix 18	AB9	E	552	571	Right-handed alpha
Helix 19	AC1	E	616	632	Right-handed alpha
Helix 20	AC2	E	635	652	Right-handed alpha
Helix 21	AC3	E	656	661	Right-handed 310
Helix 22	AC4	E	728	735	Right-handed alpha
Helix 23	AC5	E	736	746	Right-handed alpha
Helix 24	AC6	F	44	46	Right-handed 310
Helix 25	AC7	F	47	53	Right-handed alpha
Helix 26	AC8	F	91	102	Right-handed alpha
Helix 27	AC9	F	115	124	Right-handed alpha
Helix 28	AD1	F	186	202	Right-handed alpha
Helix 29	AD2	F	214	227	Right-handed alpha
Helix 30	AD3	F	260	268	Right-handed alpha
Helix 31	AD4	F	274	284	Right-handed alpha
Helix 32	AD5	F	291	302	Right-handed alpha
Helix 33	AD6	F	304	338	Right-handed alpha
Helix 34	AD7	F	340	347	Right-handed alpha
Helix 35	AD8	F	348	364	Right-handed alpha
Helix 36	AD9	F	373	380	Right-handed alpha
Helix 37	AE1	F	407	417	Right-handed alpha
Helix 38	AE2	F	449	469	Right-handed alpha
Helix 39	AE3	F	472	498	Right-handed alpha
Helix 40	AE4	F	506	531	Right-handed alpha
Helix 41	AE5	F	552	571	Right-handed alpha
Helix 42	AE6	F	616	632	Right-handed alpha
Helix 43	AE7	F	635	652	Right-handed alpha
Helix 44	AE8	F	656	661	Right-handed 310
Helix 45	AE9	F	669	673	Right-handed 310
Helix 46	AF1	F	677	689	Right-handed alpha
Helix 47	AF2	F	709	714	Right-handed alpha
Helix 48	AF3	F	718	720	Right-handed 310
Helix 49	AF4	F	728	735	Right-handed alpha
Helix 50	AF5	F	736	746	Right-handed alpha
Helix 51	AF6	F	751	756	Right-handed alpha

There are 15 sheets in PDB entry 7B0H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	10	first strand
Strand 2	E	13	22	anti-parallel
Strand 3	E	25	31	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	67	75	first strand
Strand 2	E	78	86	anti-parallel
Strand 3	E	37	42	anti-parallel
Strand 4	E	106	110	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	55	58	first strand
Strand 2	E	61	64	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	181	183	first strand
Strand 2	E	167	172	parallel
Strand 3	E	157	164	anti-parallel
Strand 4	E	137	144	anti-parallel
Strand 5	E	205	208	parallel
Strand 6	E	256	259	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	244	first strand
Strand 2	E	247	251	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	535	540	first strand
Strand 2	E	543	547	anti-parallel
Strand 3	E	396	405	anti-parallel
Strand 4	E	577	590	anti-parallel
Strand 5	E	593	597	anti-parallel
Strand 6	E	603	606	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	431	433	first strand
Strand 2	E	440	442	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	10	first strand
Strand 2	F	13	22	anti-parallel
Strand 3	F	25	31	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	67	75	first strand
Strand 2	F	78	86	anti-parallel
Strand 3	F	37	42	anti-parallel
Strand 4	F	106	110	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	55	58	first strand
Strand 2	F	61	64	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	181	183	first strand
Strand 2	F	167	172	parallel
Strand 3	F	157	164	anti-parallel
Strand 4	F	137	144	anti-parallel
Strand 5	F	205	208	parallel
Strand 6	F	256	259	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	240	244	first strand
Strand 2	F	247	251	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	535	540	first strand
Strand 2	F	543	547	anti-parallel
Strand 3	F	396	405	anti-parallel
Strand 4	F	577	590	anti-parallel
Strand 5	F	593	597	anti-parallel
Strand 6	F	603	606	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	431	433	first strand
Strand 2	F	440	442	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	662	665	first strand
Strand 2	F	698	702	anti-parallel
Strand 3	F	715	716	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7B0H

Analysis of interatomic Contacts of Structural Units in PDB entry:
7B0H