Analysis of interatomic Contacts of Structural Units in PDB entry:
7B0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B0X entry

There are 3 chains in PDB entry 7B0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLY 1HIS 211
I
 ALA 21GLN 160
D
 ASP 1ARG 123
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7B0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
94 100Right-handed 310
Helix 2
AA2
C
123 131Right-handed 310
Helix 3
AA3
I
41 45Right-handed 310
Helix 4
AA4
I
65 70Right-handed alpha
Helix 5
AA5
D
5 9Right-handed 310
Helix 6
AA6
D
15 17Right-handed 310
Helix 7
AA7
D
18 24Right-handed alpha
Helix 8
AA8
D
65 71Right-handed alpha
Helix 9
AA9
D
75 79Right-handed 310
Helix 10
AB1
D
81 85Right-handed 310
Helix 11
AB2
D
92 97Right-handed alpha
Helix 12
AB3
D
116 120Right-handed 310
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There are 8 sheets in PDB entry 7B0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 4first strand
Strand 2
C
17 24anti-parallel
Strand 3
C
61 69anti-parallel
Strand 4
C
48 51anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 12first strand
Strand 2
C
102 116parallel
Strand 3
I
34 36anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 58first strand
Strand 2
C
30 38anti-parallel
Strand 3
C
81 91anti-parallel
Strand 4
C
102 116anti-parallel
Strand 5
I
151 158parallel
Strand 6
I
72 78anti-parallel
Strand 7
I
124 125anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 135first strand
Strand 2
C
139 144anti-parallel
Strand 3
C
171 176anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 161first strand
Strand 2
C
150 157anti-parallel
Strand 3
C
165 167anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 161first strand
Strand 2
C
150 157anti-parallel
Strand 3
C
185 189anti-parallel
Strand 4
C
200 201anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
25 27first strand
Strand 2
I
55 62anti-parallel
Strand 3
I
130 139anti-parallel
Strand 4
I
100 105anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 62first strand
Strand 2
D
42 53anti-parallel
Strand 3
D
31 39anti-parallel
Strand 4
D
110 114parallel
Strand 5
D
101 105anti-parallel
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