Analysis of interatomic Contacts of Structural Units in PDB entry:
7B1H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B1H entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 12 chains in PDB entry 7B1H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 597ALA 718
A
 SER 597ALA 718
C
 PRO 460PRO 460
C
 VAL 462ALA 477
D
 PRO 460PRO 460
D
 VAL 462THR 479
E
 SER 597ALA 718
F
 SER 597ALA 718
G
 PRO 460PRO 460
G
 VAL 462ALA 477
H
 PRO 460PRO 460
H
 VAL 462SER 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7B1H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
597 638Right-handed alpha
Helix 2
AA2
B
681 685Right-handed 310
Helix 3
AA3
B
686 694Right-handed alpha
Helix 4
AA4
B
699 715Right-handed alpha
Helix 5
AA5
A
598 638Right-handed alpha
Helix 6
AA6
A
682 685Right-handed 310
Helix 7
AA7
A
686 694Right-handed alpha
Helix 8
AA8
A
699 713Right-handed alpha
Helix 9
AA9
C
461 473Right-handed alpha
Helix 10
AB1
C
474 476Right-handed 310
Helix 11
AB2
D
461 475Right-handed alpha
Helix 12
AB3
E
598 638Right-handed alpha
Helix 13
AB4
E
680 685Right-handed 310
Helix 14
AB5
E
686 694Right-handed alpha
Helix 15
AB6
E
699 715Right-handed alpha
Helix 16
AB7
F
598 638Right-handed alpha
Helix 17
AB8
F
682 685Right-handed 310
Helix 18
AB9
F
686 694Right-handed alpha
Helix 19
AC1
F
699 714Right-handed alpha
Helix 20
AC2
G
461 472Right-handed alpha
Helix 21
AC3
H
461 475Right-handed alpha
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There are 4 sheets in PDB entry 7B1H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
639 644first strand
Strand 2
B
648 653anti-parallel
Strand 3
B
663 667anti-parallel
Strand 4
B
675 677anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
639 643first strand
Strand 2
A
649 653anti-parallel
Strand 3
A
663 667anti-parallel
Strand 4
A
675 677anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
639 642first strand
Strand 2
E
648 653anti-parallel
Strand 3
E
663 667anti-parallel
Strand 4
E
675 677anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
639 643first strand
Strand 2
F
649 653anti-parallel
Strand 3
F
663 667anti-parallel
Strand 4
F
675 677anti-parallel
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