Analysis of interatomic Contacts of Structural Units in PDB entry:
7B1W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7B1W entry

There are 12 chains in PDB entry 7B1W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
J	SER 32	PRO 260
A	THR 31	PRO 260
B	SER 32	PRO 260
C	SER 32	PRO 260
D	ALA 30	PRO 260
E	SER 32	PRO 260
F	MET 27	PRO 260
G	THR 31	PRO 260
H	THR 31	PRO 260
I	THR 31	PRO 260
K	THR 31	PRO 260
L	SER 32	PRO 260

There are157 helices in PDB entry 7B1W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	J	33	37	Right-handed 310
Helix 2	AA2	J	48	51	Right-handed 310
Helix 3	AA3	J	52	54	Right-handed 310
Helix 4	AA4	J	55	66	Right-handed alpha
Helix 5	AA5	J	87	95	Right-handed alpha
Helix 6	AA6	J	110	113	Right-handed 310
Helix 7	AA7	J	114	122	Right-handed alpha
Helix 8	AA8	J	137	148	Right-handed alpha
Helix 9	AA9	J	161	169	Right-handed 310
Helix 10	AB1	J	192	208	Right-handed alpha
Helix 11	AB2	J	223	231	Right-handed alpha
Helix 12	AB3	J	238	243	Right-handed alpha
Helix 13	AB4	J	246	256	Right-handed alpha
Helix 14	AB5	A	32	37	Right-handed 310
Helix 15	AB6	A	48	51	Right-handed 310
Helix 16	AB7	A	52	54	Right-handed 310
Helix 17	AB8	A	55	66	Right-handed alpha
Helix 18	AB9	A	87	95	Right-handed alpha
Helix 19	AC1	A	110	113	Right-handed 310
Helix 20	AC2	A	114	122	Right-handed alpha
Helix 21	AC3	A	137	148	Right-handed alpha
Helix 22	AC4	A	161	169	Right-handed 310
Helix 23	AC5	A	192	208	Right-handed alpha
Helix 24	AC6	A	223	231	Right-handed alpha
Helix 25	AC7	A	238	243	Right-handed alpha
Helix 26	AC8	A	246	256	Right-handed alpha
Helix 27	AC9	B	32	37	Right-handed 310
Helix 28	AD1	B	48	51	Right-handed 310
Helix 29	AD2	B	52	54	Right-handed 310
Helix 30	AD3	B	55	66	Right-handed alpha
Helix 31	AD4	B	87	95	Right-handed alpha
Helix 32	AD5	B	110	113	Right-handed 310
Helix 33	AD6	B	114	122	Right-handed alpha
Helix 34	AD7	B	137	148	Right-handed alpha
Helix 35	AD8	B	161	169	Right-handed 310
Helix 36	AD9	B	192	208	Right-handed alpha
Helix 37	AE1	B	223	231	Right-handed alpha
Helix 38	AE2	B	238	243	Right-handed alpha
Helix 39	AE3	B	246	256	Right-handed alpha
Helix 40	AE4	C	33	37	Right-handed 310
Helix 41	AE5	C	48	51	Right-handed 310
Helix 42	AE6	C	52	54	Right-handed 310
Helix 43	AE7	C	55	66	Right-handed alpha
Helix 44	AE8	C	87	95	Right-handed alpha
Helix 45	AE9	C	110	113	Right-handed 310
Helix 46	AF1	C	114	122	Right-handed alpha
Helix 47	AF2	C	137	148	Right-handed alpha
Helix 48	AF3	C	161	169	Right-handed 310
Helix 49	AF4	C	192	208	Right-handed alpha
Helix 50	AF5	C	223	231	Right-handed alpha
Helix 51	AF6	C	238	243	Right-handed alpha
Helix 52	AF7	C	246	256	Right-handed alpha
Helix 53	AF8	D	32	37	Right-handed 310
Helix 54	AF9	D	48	51	Right-handed 310
Helix 55	AG1	D	52	54	Right-handed 310
Helix 56	AG2	D	55	66	Right-handed alpha
Helix 57	AG3	D	87	95	Right-handed alpha
Helix 58	AG4	D	110	113	Right-handed 310
Helix 59	AG5	D	114	121	Right-handed alpha
Helix 60	AG6	D	137	148	Right-handed alpha
Helix 61	AG7	D	161	166	Right-handed 310
Helix 62	AG8	D	192	208	Right-handed alpha
Helix 63	AG9	D	223	231	Right-handed alpha
Helix 64	AH1	D	238	243	Right-handed alpha
Helix 65	AH2	D	246	256	Right-handed alpha
Helix 66	AH3	E	32	37	Right-handed 310
Helix 67	AH4	E	48	51	Right-handed 310
Helix 68	AH5	E	52	54	Right-handed 310
Helix 69	AH6	E	55	66	Right-handed alpha
Helix 70	AH7	E	87	95	Right-handed alpha
Helix 71	AH8	E	110	113	Right-handed 310
Helix 72	AH9	E	114	122	Right-handed alpha
Helix 73	AI1	E	137	148	Right-handed alpha
Helix 74	AI2	E	161	169	Right-handed 310
Helix 75	AI3	E	192	208	Right-handed alpha
Helix 76	AI4	E	223	231	Right-handed alpha
Helix 77	AI5	E	238	243	Right-handed alpha
Helix 78	AI6	E	246	256	Right-handed alpha
Helix 79	AI7	F	32	37	Right-handed 310
Helix 80	AI8	F	48	51	Right-handed 310
Helix 81	AI9	F	52	54	Right-handed 310
Helix 82	AJ1	F	55	66	Right-handed alpha
Helix 83	AJ2	F	87	95	Right-handed alpha
Helix 84	AJ3	F	110	113	Right-handed 310
Helix 85	AJ4	F	114	122	Right-handed alpha
Helix 86	AJ5	F	137	148	Right-handed alpha
Helix 87	AJ6	F	161	166	Right-handed 310
Helix 88	AJ7	F	192	208	Right-handed alpha
Helix 89	AJ8	F	223	231	Right-handed alpha
Helix 90	AJ9	F	238	243	Right-handed alpha
Helix 91	AK1	F	246	256	Right-handed alpha
Helix 92	AK2	G	33	37	Right-handed 310
Helix 93	AK3	G	48	51	Right-handed 310
Helix 94	AK4	G	52	54	Right-handed 310
Helix 95	AK5	G	55	66	Right-handed alpha
Helix 96	AK6	G	87	95	Right-handed alpha
Helix 97	AK7	G	110	113	Right-handed 310
Helix 98	AK8	G	114	122	Right-handed alpha
Helix 99	AK9	G	137	148	Right-handed alpha
Helix 100	AL1	G	161	166	Right-handed 310
Helix 101	AL2	G	192	208	Right-handed alpha
Helix 102	AL3	G	223	231	Right-handed alpha
Helix 103	AL4	G	238	243	Right-handed alpha
Helix 104	AL5	G	246	256	Right-handed alpha
Helix 105	AL6	H	32	37	Right-handed 310
Helix 106	AL7	H	48	51	Right-handed 310
Helix 107	AL8	H	52	54	Right-handed 310
Helix 108	AL9	H	55	66	Right-handed alpha
Helix 109	AM1	H	87	95	Right-handed alpha
Helix 110	AM2	H	110	113	Right-handed 310
Helix 111	AM3	H	114	122	Right-handed alpha
Helix 112	AM4	H	137	148	Right-handed alpha
Helix 113	AM5	H	161	169	Right-handed 310
Helix 114	AM6	H	192	208	Right-handed alpha
Helix 115	AM7	H	223	231	Right-handed alpha
Helix 116	AM8	H	238	243	Right-handed alpha
Helix 117	AM9	H	246	256	Right-handed alpha
Helix 118	AN1	I	48	51	Right-handed 310
Helix 119	AN2	I	52	54	Right-handed 310
Helix 120	AN3	I	55	67	Right-handed alpha
Helix 121	AN4	I	87	95	Right-handed alpha
Helix 122	AN5	I	96	98	Right-handed 310
Helix 123	AN6	I	110	113	Right-handed 310
Helix 124	AN7	I	114	121	Right-handed alpha
Helix 125	AN8	I	137	148	Right-handed alpha
Helix 126	AN9	I	161	169	Right-handed 310
Helix 127	AO1	I	192	208	Right-handed alpha
Helix 128	AO2	I	223	230	Right-handed alpha
Helix 129	AO3	I	238	243	Right-handed alpha
Helix 130	AO4	I	246	256	Right-handed alpha
Helix 131	AO5	K	32	37	Right-handed 310
Helix 132	AO6	K	48	51	Right-handed 310
Helix 133	AO7	K	52	54	Right-handed 310
Helix 134	AO8	K	55	66	Right-handed alpha
Helix 135	AO9	K	87	95	Right-handed alpha
Helix 136	AP1	K	96	98	Right-handed 310
Helix 137	AP2	K	110	113	Right-handed 310
Helix 138	AP3	K	114	121	Right-handed alpha
Helix 139	AP4	K	137	148	Right-handed alpha
Helix 140	AP5	K	161	169	Right-handed 310
Helix 141	AP6	K	192	208	Right-handed alpha
Helix 142	AP7	K	224	231	Right-handed alpha
Helix 143	AP8	K	238	243	Right-handed alpha
Helix 144	AP9	K	246	256	Right-handed alpha
Helix 145	AQ1	L	32	37	Right-handed 310
Helix 146	AQ2	L	48	51	Right-handed 310
Helix 147	AQ3	L	52	54	Right-handed 310
Helix 148	AQ4	L	55	66	Right-handed alpha
Helix 149	AQ5	L	87	95	Right-handed alpha
Helix 150	AQ6	L	110	113	Right-handed 310
Helix 151	AQ7	L	114	122	Right-handed alpha
Helix 152	AQ8	L	137	148	Right-handed alpha
Helix 153	AQ9	L	161	169	Right-handed 310
Helix 154	AR1	L	191	208	Right-handed alpha
Helix 155	AR2	L	223	230	Right-handed alpha
Helix 156	AR3	L	238	243	Right-handed alpha
Helix 157	AR4	L	246	256	Right-handed alpha

There are 12 sheets in PDB entry 7B1W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	43	46	first strand
Strand 2	J	234	237	parallel
Strand 3	J	212	216	parallel
Strand 4	J	174	178	parallel
Strand 5	J	151	156	parallel
Strand 6	J	125	129	parallel
Strand 7	J	101	107	parallel
Strand 8	J	70	76	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	46	first strand
Strand 2	A	234	237	parallel
Strand 3	A	212	216	parallel
Strand 4	A	174	178	parallel
Strand 5	A	151	156	parallel
Strand 6	A	125	129	parallel
Strand 7	A	101	107	parallel
Strand 8	A	70	76	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	46	first strand
Strand 2	B	234	237	parallel
Strand 3	B	212	216	parallel
Strand 4	B	174	178	parallel
Strand 5	B	151	156	parallel
Strand 6	B	125	129	parallel
Strand 7	B	101	107	parallel
Strand 8	B	70	76	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	46	first strand
Strand 2	C	234	237	parallel
Strand 3	C	212	216	parallel
Strand 4	C	174	178	parallel
Strand 5	C	151	156	parallel
Strand 6	C	125	129	parallel
Strand 7	C	101	107	parallel
Strand 8	C	70	76	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	43	46	first strand
Strand 2	D	234	237	parallel
Strand 3	D	212	216	parallel
Strand 4	D	174	178	parallel
Strand 5	D	151	156	parallel
Strand 6	D	125	129	parallel
Strand 7	D	101	107	parallel
Strand 8	D	70	76	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	43	46	first strand
Strand 2	E	234	237	parallel
Strand 3	E	212	216	parallel
Strand 4	E	174	178	parallel
Strand 5	E	151	156	parallel
Strand 6	E	125	129	parallel
Strand 7	E	101	107	parallel
Strand 8	E	70	76	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	43	46	first strand
Strand 2	F	234	237	parallel
Strand 3	F	212	216	parallel
Strand 4	F	174	178	parallel
Strand 5	F	151	156	parallel
Strand 6	F	125	129	parallel
Strand 7	F	101	107	parallel
Strand 8	F	70	76	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	43	46	first strand
Strand 2	G	234	237	parallel
Strand 3	G	212	216	parallel
Strand 4	G	174	178	parallel
Strand 5	G	151	156	parallel
Strand 6	G	125	129	parallel
Strand 7	G	101	107	parallel
Strand 8	G	70	76	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	43	46	first strand
Strand 2	H	234	237	parallel
Strand 3	H	212	216	parallel
Strand 4	H	174	178	parallel
Strand 5	H	151	156	parallel
Strand 6	H	125	129	parallel
Strand 7	H	101	107	parallel
Strand 8	H	70	76	parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	43	46	first strand
Strand 2	I	234	237	parallel
Strand 3	I	212	216	parallel
Strand 4	I	174	178	parallel
Strand 5	I	151	156	parallel
Strand 6	I	125	129	parallel
Strand 7	I	101	107	parallel
Strand 8	I	70	76	parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	43	46	first strand
Strand 2	K	234	237	parallel
Strand 3	K	212	216	parallel
Strand 4	K	174	178	parallel
Strand 5	K	151	156	parallel
Strand 6	K	125	129	parallel
Strand 7	K	101	107	parallel
Strand 8	K	70	76	parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	43	46	first strand
Strand 2	L	234	237	parallel
Strand 3	L	212	216	parallel
Strand 4	L	174	178	parallel
Strand 5	L	151	156	parallel
Strand 6	L	125	129	parallel
Strand 7	L	101	107	parallel
Strand 8	L	70	76	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7B1W

Analysis of interatomic Contacts of Structural Units in PDB entry:
7B1W