Analysis of interatomic Contacts of Structural Units in PDB entry:
7B35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B35 entry

There are 2 chains in PDB entry 7B35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 26HIS 304
B
 THR 26HIS 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7B35. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 35Right-handed alpha
Helix 2
AA2
A
70 74Right-handed 310
Helix 3
AA3
A
75 88Right-handed alpha
Helix 4
AA4
A
119 123Right-handed alpha
Helix 5
AA5
A
129 150Right-handed alpha
Helix 6
AA6
A
158 160Right-handed 310
Helix 7
AA7
A
199 204Right-handed alpha
Helix 8
AA8
A
209 227Right-handed alpha
Helix 9
AA9
A
235 246Right-handed alpha
Helix 10
AB1
A
256 267Right-handed alpha
Helix 11
AB2
A
270 274Right-handed 310
Helix 12
AB3
A
276 281Right-handed alpha
Helix 13
AB4
A
283 290Right-handed alpha
Helix 14
AB5
A
292 295Right-handed 310
Helix 15
AB6
A
296 304Right-handed alpha
Helix 16
AB7
B
31 35Right-handed alpha
Helix 17
AB8
B
75 89Right-handed alpha
Helix 18
AB9
B
120 124Right-handed 310
Helix 19
AC1
B
129 150Right-handed alpha
Helix 20
AC2
B
158 160Right-handed 310
Helix 21
AC3
B
199 204Right-handed alpha
Helix 22
AC4
B
209 227Right-handed alpha
Helix 23
AC5
B
235 246Right-handed alpha
Helix 24
AC6
B
256 267Right-handed alpha
Helix 25
AC7
B
270 274Right-handed 310
Helix 26
AC8
B
276 281Right-handed alpha
Helix 27
AC9
B
283 290Right-handed alpha
Helix 28
AD1
B
292 294Right-handed 310
Helix 29
AD2
B
295 303Right-handed alpha
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There are 4 sheets in PDB entry 7B35. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 44first strand
Strand 2
A
49 55anti-parallel
Strand 3
A
61 68anti-parallel
Strand 4
A
106 112anti-parallel
Strand 5
A
97 103anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
162 164anti-parallel
Strand 3
A
170 172anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 44first strand
Strand 2
B
49 55anti-parallel
Strand 3
B
61 68anti-parallel
Strand 4
B
106 112anti-parallel
Strand 5
B
97 103anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
117 118first strand
Strand 2
B
162 164anti-parallel
Strand 3
B
170 172anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il