Analysis of interatomic Contacts of Structural Units in PDB entry:
7B4Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B4Q entry

There are 2 chains in PDB entry 7B4Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 314
B
 MET 1GLU 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7B4Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 5Right-handed 310
Helix 2
AA2
A
6 8Right-handed 310
Helix 3
AA3
A
9 15Right-handed alpha
Helix 4
AA4
A
23 38Right-handed alpha
Helix 5
AA5
A
91 94Right-handed 310
Helix 6
AA6
A
95 107Right-handed alpha
Helix 7
AA7
A
124 140Right-handed alpha
Helix 8
AA8
A
140 145Right-handed alpha
Helix 9
AA9
A
157 173Right-handed alpha
Helix 10
AB1
A
194 200Right-handed alpha
Helix 11
AB2
A
207 219Right-handed alpha
Helix 12
AB3
A
233 237Right-handed 310
Helix 13
AB4
A
256 270Right-handed alpha
Helix 14
AB5
A
285 290Right-handed alpha
Helix 15
AB6
A
293 313Right-handed alpha
Helix 16
AB7
B
1 5Right-handed 310
Helix 17
AB8
B
6 8Right-handed 310
Helix 18
AB9
B
9 16Right-handed alpha
Helix 19
AC1
B
23 37Right-handed alpha
Helix 20
AC2
B
91 94Right-handed 310
Helix 21
AC3
B
95 107Right-handed alpha
Helix 22
AC4
B
124 140Right-handed alpha
Helix 23
AC5
B
140 145Right-handed alpha
Helix 24
AC6
B
157 173Right-handed alpha
Helix 25
AC7
B
194 200Right-handed alpha
Helix 26
AC8
B
207 219Right-handed alpha
Helix 27
AC9
B
233 237Right-handed 310
Helix 28
AD1
B
256 270Right-handed alpha
Helix 29
AD2
B
285 290Right-handed alpha
Helix 30
AD3
B
293 313Right-handed alpha
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There are 3 sheets in PDB entry 7B4Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 53first strand
Strand 2
A
62 69anti-parallel
Strand 3
A
109 114anti-parallel
Strand 4
A
76 82parallel
Strand 5
A
146 156parallel
Strand 6
A
180 184parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 251first strand
Strand 2
A
274 279parallel
Strand 3
B
274 279anti-parallel
Strand 4
B
246 251parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 54first strand
Strand 2
B
61 69anti-parallel
Strand 3
B
109 114anti-parallel
Strand 4
B
76 82parallel
Strand 5
B
146 156parallel
Strand 6
B
180 184parallel
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