Analysis of interatomic Contacts of Structural Units in PDB entry:
7B57


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B57 entry

There are 2 chains in PDB entry 7B57 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 5MET 307
A
 THR 827TYR 889
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7B57. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
7 12Right-handed alpha
Helix 2
AA2
B
50 67Right-handed alpha
Helix 3
AA3
B
96 104Right-handed alpha
Helix 4
AA4
B
108 129Right-handed alpha
Helix 5
AA5
B
137 139Right-handed 310
Helix 6
AA6
B
176 180Right-handed 310
Helix 7
AA7
B
181 186Right-handed alpha
Helix 8
AA8
B
192 209Right-handed alpha
Helix 9
AA9
B
217 227Right-handed alpha
Helix 10
AB1
B
235 240Right-handed 310
Helix 11
AB2
B
241 252Right-handed alpha
Helix 12
AB3
B
261 267Right-handed alpha
Helix 13
AB4
B
268 273Right-handed alpha
Helix 14
AB5
B
273 278Right-handed alpha
Helix 15
AB6
B
283 307Right-handed alpha
Helix 16
AB7
A
828 839Right-handed alpha
Helix 17
AB8
A
846 854Right-handed alpha
Helix 18
AB9
A
855 864Right-handed alpha
Helix 19
AC1
A
880 887Right-handed alpha
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There are 3 sheets in PDB entry 7B57. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 21first strand
Strand 2
B
26 32anti-parallel
Strand 3
B
37 45anti-parallel
Strand 4
B
84 90anti-parallel
Strand 5
B
75 80anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 132first strand
Strand 2
B
161 162anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 143first strand
Strand 2
B
152 154anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il