Analysis of interatomic Contacts of Structural Units in PDB entry:
7B5G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7B5G entry

There are 8 chains in PDB entry 7B5G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 71	LEU 202
B	GLN 1	HIS 123
C	GLU 73	LEU 202
D	GLN 1	HIS 124
E	GLU 73	LEU 202
F	GLN 1	HIS 125
G	GLU 74	LEU 202
H	GLN 1	HIS 124

There are 19 helices in PDB entry 7B5G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	90	92	Right-handed 310
Helix 2	AA2	A	120	124	Right-handed 310
Helix 3	AA3	B	28	32	Right-handed 310
Helix 4	AA4	B	87	91	Right-handed 310
Helix 5	AA5	C	90	92	Right-handed 310
Helix 6	AA6	C	101	105	Right-handed 310
Helix 7	AA7	C	120	124	Right-handed 310
Helix 8	AA8	D	28	32	Right-handed 310
Helix 9	AA9	D	62	65	Right-handed 310
Helix 10	AB1	D	87	91	Right-handed 310
Helix 11	AB2	E	90	92	Right-handed 310
Helix 12	AB3	E	120	124	Right-handed 310
Helix 13	AB4	F	28	32	Right-handed 310
Helix 14	AB5	F	62	65	Right-handed 310
Helix 15	AB6	F	87	91	Right-handed 310
Helix 16	AB7	G	90	92	Right-handed 310
Helix 17	AB8	G	120	124	Right-handed 310
Helix 18	AB9	H	62	65	Right-handed 310
Helix 19	AC1	H	87	91	Right-handed 310

There are 16 sheets in PDB entry 7B5G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	98	first strand
Strand 2	A	76	79	anti-parallel
Strand 3	A	111	114	parallel
Strand 4	A	130	135	anti-parallel
Strand 5	A	186	196	anti-parallel
Strand 6	A	144	149	anti-parallel
Strand 7	A	152	161	anti-parallel
Strand 8	A	164	168	anti-parallel
Strand 9	A	177	180	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	7	first strand
Strand 2	B	18	24	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	68	73	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	13	first strand
Strand 2	B	116	121	parallel
Strand 3	B	92	102	anti-parallel
Strand 4	B	33	39	anti-parallel
Strand 5	B	46	51	anti-parallel
Strand 6	B	58	60	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	13	first strand
Strand 2	B	116	121	parallel
Strand 3	B	92	102	anti-parallel
Strand 4	B	105	112	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	98	first strand
Strand 2	C	76	79	anti-parallel
Strand 3	C	111	114	parallel
Strand 4	C	130	135	anti-parallel
Strand 5	C	186	196	anti-parallel
Strand 6	C	144	149	anti-parallel
Strand 7	C	152	161	anti-parallel
Strand 8	C	164	168	anti-parallel
Strand 9	C	177	180	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	7	first strand
Strand 2	D	17	24	anti-parallel
Strand 3	D	78	84	anti-parallel
Strand 4	D	68	73	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	13	first strand
Strand 2	D	116	121	parallel
Strand 3	D	92	102	anti-parallel
Strand 4	D	33	39	anti-parallel
Strand 5	D	46	51	anti-parallel
Strand 6	D	58	60	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	13	first strand
Strand 2	D	116	121	parallel
Strand 3	D	92	102	anti-parallel
Strand 4	D	105	112	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	94	98	first strand
Strand 2	E	76	79	anti-parallel
Strand 3	E	111	114	parallel
Strand 4	E	130	135	anti-parallel
Strand 5	E	186	196	anti-parallel
Strand 6	E	144	149	anti-parallel
Strand 7	E	152	161	anti-parallel
Strand 8	E	164	168	anti-parallel
Strand 9	E	177	180	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	7	first strand
Strand 2	F	18	24	anti-parallel
Strand 3	F	78	83	anti-parallel
Strand 4	F	68	73	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	116	121	parallel
Strand 3	F	92	102	anti-parallel
Strand 4	F	33	39	anti-parallel
Strand 5	F	46	51	anti-parallel
Strand 6	F	58	60	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	116	121	parallel
Strand 3	F	92	102	anti-parallel
Strand 4	F	105	112	anti-parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	94	98	first strand
Strand 2	G	76	79	anti-parallel
Strand 3	G	111	114	parallel
Strand 4	G	130	134	anti-parallel
Strand 5	G	186	196	anti-parallel
Strand 6	G	144	149	anti-parallel
Strand 7	G	152	161	anti-parallel
Strand 8	G	164	168	anti-parallel
Strand 9	G	177	180	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	116	121	parallel
Strand 3	H	92	101	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	46	51	anti-parallel
Strand 6	H	58	60	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	116	121	parallel
Strand 3	H	92	101	anti-parallel
Strand 4	H	106	112	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7B5G

Analysis of interatomic Contacts of Structural Units in PDB entry:
7B5G