Analysis of interatomic Contacts of Structural Units in PDB entry:
7B5O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B5O entry

There are 3 chains in PDB entry 7B5O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 ALA 244PRO 308
I
 MET 1GLU 284
J
 LYS 10ASN 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7B5O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
270 275Right-handed 310
Helix 2
AA2
H
279 286Right-handed alpha
Helix 3
AA3
H
289 302Right-handed alpha
Helix 4
AA4
I
1 4Right-handed 310
Helix 5
AA5
I
5 11Right-handed alpha
Helix 6
AA6
I
15 38Right-handed alpha
Helix 7
AA7
I
49 70Right-handed alpha
Helix 8
AA8
I
76 94Right-handed alpha
Helix 9
AA9
I
100 116Right-handed alpha
Helix 10
AB1
I
121 128Right-handed alpha
Helix 11
AB2
I
132 154Right-handed alpha
Helix 12
AB3
I
163 178Right-handed alpha
Helix 13
AB4
I
184 201Right-handed alpha
Helix 14
AB5
I
202 206Right-handed 310
Helix 15
AB6
I
208 224Right-handed alpha
Helix 16
AB7
I
228 234Right-handed alpha
Helix 17
AB8
I
241 261Right-handed alpha
Helix 18
AB9
I
266 283Right-handed alpha
Helix 19
AC1
J
56 67Right-handed alpha
Helix 20
AC2
J
98 104Right-handed alpha
Helix 21
AC3
J
110 131Right-handed alpha
Helix 22
AC4
J
175 179Right-handed 310
Helix 23
AC5
J
180 185Right-handed alpha
Helix 24
AC6
J
192 209Right-handed alpha
Helix 25
AC7
J
217 230Right-handed alpha
Helix 26
AC8
J
239 243Right-handed 310
Helix 27
AC9
J
256 261Right-handed alpha
Helix 28
AD1
J
265 276Right-handed alpha
Helix 29
AD2
J
285 291Right-handed alpha
Helix 30
AD3
J
292 297Right-handed alpha
Helix 31
AD4
J
303 307Right-handed 310
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There are 3 sheets in PDB entry 7B5O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
12 21first strand
Strand 2
J
24 31anti-parallel
Strand 3
J
36 43anti-parallel
Strand 4
J
86 92anti-parallel
Strand 5
J
77 83anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
96 97first strand
Strand 2
J
143 145anti-parallel
Strand 3
J
151 153anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
133 134first strand
Strand 2
J
160 161anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il