Analysis of interatomic Contacts of Structural Units in PDB entry:
7B60


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B60 entry

There are 2 chains in PDB entry 7B60 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4ALA 495
B
 ARG 4ALA 495
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7B60. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
47 50Right-handed 310
Helix 3
AA3
A
51 58Right-handed alpha
Helix 4
AA4
A
89 102Right-handed alpha
Helix 5
AA5
A
104 108Right-handed 310
Helix 6
AA6
A
119 134Right-handed alpha
Helix 7
AA7
A
161 175Right-handed alpha
Helix 8
AA8
A
185 191Right-handed alpha
Helix 9
AA9
A
214 231Right-handed alpha
Helix 10
AB1
A
243 251Right-handed alpha
Helix 11
AB2
A
266 270Right-handed 310
Helix 12
AB3
A
305 322Right-handed alpha
Helix 13
AB4
A
325 333Right-handed alpha
Helix 14
AB5
A
334 336Right-handed 310
Helix 15
AB6
A
361 375Right-handed alpha
Helix 16
AB7
A
393 406Right-handed alpha
Helix 17
AB8
A
420 431Right-handed alpha
Helix 18
AB9
A
434 438Right-handed 310
Helix 19
AC1
A
443 455Right-handed alpha
Helix 20
AC2
A
482 492Right-handed alpha
Helix 21
AC3
B
5 11Right-handed alpha
Helix 22
AC4
B
47 50Right-handed 310
Helix 23
AC5
B
51 58Right-handed alpha
Helix 24
AC6
B
89 102Right-handed alpha
Helix 25
AC7
B
104 108Right-handed 310
Helix 26
AC8
B
119 134Right-handed alpha
Helix 27
AC9
B
161 175Right-handed alpha
Helix 28
AD1
B
185 191Right-handed alpha
Helix 29
AD2
B
218 231Right-handed alpha
Helix 30
AD3
B
243 251Right-handed alpha
Helix 31
AD4
B
266 270Right-handed 310
Helix 32
AD5
B
305 322Right-handed alpha
Helix 33
AD6
B
325 333Right-handed alpha
Helix 34
AD7
B
334 336Right-handed 310
Helix 35
AD8
B
361 375Right-handed alpha
Helix 36
AD9
B
393 406Right-handed alpha
Helix 37
AE1
B
420 430Right-handed alpha
Helix 38
AE2
B
434 438Right-handed 310
Helix 39
AE3
B
443 455Right-handed alpha
Helix 40
AE4
B
482 492Right-handed alpha
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There are 8 sheets in PDB entry 7B60. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
37 40parallel
Strand 3
A
62 66parallel
Strand 4
A
82 87parallel
Strand 5
A
75 79anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 148first strand
Strand 2
A
138 141anti-parallel
Strand 3
A
179 183parallel
Strand 4
A
110 115parallel
Strand 5
A
201 204parallel
Strand 6
A
236 240parallel
Strand 7
A
257 260parallel
Strand 8
A
272 282parallel
Strand 9
A
285 292anti-parallel
Strand 10
A
297 301anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 346first strand
Strand 2
A
353 357anti-parallel
Strand 3
A
460 464parallel
Strand 4
A
380 384parallel
Strand 5
A
408 411parallel
Strand 6
A
439 440parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 474first strand
Strand 2
A
477 480anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 26first strand
Strand 2
B
37 40parallel
Strand 3
B
62 66parallel
Strand 4
B
82 87parallel
Strand 5
B
75 79anti-parallel
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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 148first strand
Strand 2
B
138 141anti-parallel
Strand 3
B
179 183parallel
Strand 4
B
110 115parallel
Strand 5
B
201 204parallel
Strand 6
B
236 240parallel
Strand 7
B
257 260parallel
Strand 8
B
272 282parallel
Strand 9
B
285 292anti-parallel
Strand 10
B
297 301anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 346first strand
Strand 2
B
353 357anti-parallel
Strand 3
B
460 464parallel
Strand 4
B
380 384parallel
Strand 5
B
408 411parallel
Strand 6
B
439 440parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
471 474first strand
Strand 2
B
477 480anti-parallel
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