Analysis of interatomic Contacts of Structural Units in PDB entry:
7B6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B6B entry

There are 2 chains in PDB entry 7B6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 295LYS 656
B
 GLU 295LYS 656
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7B6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
314 316Right-handed 310
Helix 2
AA2
A
462 473Right-handed alpha
Helix 3
AA3
A
508 518Right-handed alpha
Helix 4
AA4
A
518 527Right-handed alpha
Helix 5
AA5
A
532 534Right-handed 310
Helix 6
AA6
A
542 554Right-handed alpha
Helix 7
AA7
A
555 559Right-handed 310
Helix 8
AA8
A
576 578Right-handed 310
Helix 9
AA9
A
579 584Right-handed alpha
Helix 10
AB1
A
587 595Right-handed alpha
Helix 11
AB2
A
607 625Right-handed alpha
Helix 12
AB3
A
639 654Right-handed alpha
Helix 13
AB4
B
314 316Right-handed 310
Helix 14
AB5
B
462 473Right-handed alpha
Helix 15
AB6
B
509 518Right-handed alpha
Helix 16
AB7
B
518 527Right-handed alpha
Helix 17
AB8
B
532 534Right-handed 310
Helix 18
AB9
B
542 554Right-handed alpha
Helix 19
AC1
B
576 578Right-handed 310
Helix 20
AC2
B
579 584Right-handed alpha
Helix 21
AC3
B
587 595Right-handed alpha
Helix 22
AC4
B
607 625Right-handed alpha
Helix 23
AC5
B
639 654Right-handed alpha
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There are 7 sheets in PDB entry 7B6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
A
311 312anti-parallel
Strand 3
A
318 323anti-parallel
Strand 4
A
347 351anti-parallel
Strand 5
A
341 342anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 339first strand
Strand 2
A
330 333anti-parallel
Strand 3
A
358 366anti-parallel
Strand 4
A
369 371anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 339first strand
Strand 2
A
330 333anti-parallel
Strand 3
A
358 366anti-parallel
Strand 4
A
384 391anti-parallel
Strand 5
A
378 381anti-parallel
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There are 16 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
629 633first strand
Strand 2
A
597 603parallel
Strand 3
A
561 565parallel
Strand 4
A
536 541parallel
Strand 5
A
443 447parallel
Strand 6
A
480 483parallel
Strand 7
A
421 429anti-parallel
Strand 8
A
408 416anti-parallel
Strand 9
B
408 416anti-parallel
Strand 10
B
421 429anti-parallel
Strand 11
B
480 483anti-parallel
Strand 12
B
443 447parallel
Strand 13
B
536 541parallel
Strand 14
B
561 565parallel
Strand 15
B
597 603parallel
Strand 16
B
629 633parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
298 299first strand
Strand 2
B
311 312anti-parallel
Strand 3
B
318 323anti-parallel
Strand 4
B
347 351anti-parallel
Strand 5
B
341 342anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 339first strand
Strand 2
B
330 333anti-parallel
Strand 3
B
358 366anti-parallel
Strand 4
B
369 371anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 339first strand
Strand 2
B
330 333anti-parallel
Strand 3
B
358 366anti-parallel
Strand 4
B
384 391anti-parallel
Strand 5
B
378 381anti-parallel
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