Analysis of interatomic Contacts of Structural Units in PDB entry:
7B6R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7B6R entry

There are 10 chains in PDB entry 7B6R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 355	SER 661
B	MET 1	ASN 718
C	ALA 10	PRO 174
D	SER 2	ASN 152
E	MET 1	ILE 145
F	MET 1	LYS 219
G	MET 1	SER 139
H	SER 31	LYS 194
I	ALA 10	ASP 178
J	MET 1	ALA 138

There are 71 helices in PDB entry 7B6R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	355	384	Right-handed alpha
Helix 2	AA2	A	425	438	Right-handed alpha
Helix 3	AA3	A	442	456	Right-handed alpha
Helix 4	AA4	A	461	477	Right-handed alpha
Helix 5	AA5	A	483	500	Right-handed alpha
Helix 6	AA6	A	502	519	Right-handed alpha
Helix 7	AA7	A	523	535	Right-handed alpha
Helix 8	AA8	A	540	557	Right-handed alpha
Helix 9	AA9	A	561	579	Right-handed alpha
Helix 10	AB1	A	580	598	Right-handed alpha
Helix 11	AB2	A	600	614	Right-handed alpha
Helix 12	AB3	A	620	632	Right-handed alpha
Helix 13	AB4	A	639	661	Right-handed alpha
Helix 14	AB5	B	26	46	Right-handed alpha
Helix 15	AB6	B	85	94	Right-handed alpha
Helix 16	AB7	B	111	135	Right-handed alpha
Helix 17	AB8	B	154	168	Right-handed alpha
Helix 18	AB9	B	171	173	Right-handed 310
Helix 19	AC1	B	180	216	Right-handed alpha
Helix 20	AC2	B	223	239	Right-handed alpha
Helix 21	AC3	B	241	259	Right-handed alpha
Helix 22	AC4	B	265	288	Right-handed alpha
Helix 23	AC5	B	289	308	Right-handed alpha
Helix 24	AC6	B	318	339	Right-handed alpha
Helix 25	AC7	B	341	347	Right-handed alpha
Helix 26	AC8	B	351	374	Right-handed alpha
Helix 27	AC9	B	408	422	Right-handed alpha
Helix 28	AD1	B	425	442	Right-handed alpha
Helix 29	AD2	B	444	463	Right-handed alpha
Helix 30	AD3	B	464	482	Right-handed alpha
Helix 31	AD4	B	484	503	Right-handed alpha
Helix 32	AD5	B	504	518	Right-handed alpha
Helix 33	AD6	B	523	540	Right-handed alpha
Helix 34	AD7	B	544	548	Right-handed 310
Helix 35	AD8	B	550	560	Right-handed alpha
Helix 36	AD9	C	17	33	Right-handed alpha
Helix 37	AE1	C	37	63	Right-handed alpha
Helix 38	AE2	C	69	84	Right-handed alpha
Helix 39	AE3	C	126	140	Right-handed alpha
Helix 40	AE4	C	151	155	Right-handed 310
Helix 41	AE5	D	4	17	Right-handed alpha
Helix 42	AE6	D	27	42	Right-handed alpha
Helix 43	AE7	D	58	70	Right-handed alpha
Helix 44	AE8	D	94	99	Right-handed 310
Helix 45	AE9	D	107	114	Right-handed alpha
Helix 46	AF1	D	115	117	Right-handed 310
Helix 47	AF2	E	30	53	Right-handed alpha
Helix 48	AF3	E	93	104	Right-handed alpha
Helix 49	AF4	E	104	109	Right-handed alpha
Helix 50	AF5	E	123	135	Right-handed alpha
Helix 51	AF6	F	81	88	Right-handed alpha
Helix 52	AF7	F	104	121	Right-handed alpha
Helix 53	AF8	F	165	182	Right-handed alpha
Helix 54	AF9	F	195	210	Right-handed alpha
Helix 55	AG1	G	26	55	Right-handed alpha
Helix 56	AG2	G	93	111	Right-handed alpha
Helix 57	AG3	G	122	136	Right-handed alpha
Helix 58	AG4	H	32	50	Right-handed alpha
Helix 59	AG5	H	52	81	Right-handed alpha
Helix 60	AG6	H	87	104	Right-handed alpha
Helix 61	AG7	H	128	133	Right-handed alpha
Helix 62	AG8	H	144	160	Right-handed alpha
Helix 63	AG9	H	181	192	Right-handed alpha
Helix 64	AH1	I	14	33	Right-handed alpha
Helix 65	AH2	I	35	59	Right-handed alpha
Helix 66	AH3	I	69	85	Right-handed alpha
Helix 67	AH4	I	117	121	Right-handed 310
Helix 68	AH5	I	126	140	Right-handed alpha
Helix 69	AH6	J	29	48	Right-handed alpha
Helix 70	AH7	J	92	111	Right-handed alpha
Helix 71	AH8	J	123	138	Right-handed alpha

There are 12 sheets in PDB entry 7B6R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	23	first strand
Strand 2	B	58	59	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	105	first strand
Strand 2	B	137	143	parallel
Strand 3	B	175	177	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	92	first strand
Strand 2	C	100	105	anti-parallel
Strand 3	C	159	168	anti-parallel
Strand 4	C	142	150	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	80	first strand
Strand 2	D	86	90	anti-parallel
Strand 3	D	143	147	anti-parallel
Strand 4	D	133	135	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	20	first strand
Strand 2	E	5	9	anti-parallel
Strand 3	E	81	86	anti-parallel
Strand 4	E	70	75	anti-parallel
Strand 5	E	61	65	anti-parallel
Strand 6	F	136	139	anti-parallel
Strand 7	F	143	148	anti-parallel
Strand 8	F	154	159	anti-parallel
Strand 9	F	5	9	anti-parallel
Strand 10	F	19	20	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	27	32	first strand
Strand 2	F	94	99	anti-parallel
Strand 3	F	62	63	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	41	43	first strand
Strand 2	F	46	48	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	66	first strand
Strand 2	F	69	70	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	15	21	first strand
Strand 2	G	4	9	anti-parallel
Strand 3	G	81	86	anti-parallel
Strand 4	G	70	75	anti-parallel
Strand 5	G	59	60	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	110	113	first strand
Strand 2	H	120	124	anti-parallel
Strand 3	H	175	180	anti-parallel
Strand 4	H	164	169	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	90	92	first strand
Strand 2	I	101	105	anti-parallel
Strand 3	I	159	165	anti-parallel
Strand 4	I	144	150	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	15	20	first strand
Strand 2	J	2	8	anti-parallel
Strand 3	J	77	84	anti-parallel
Strand 4	J	66	73	anti-parallel
Strand 5	J	55	63	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7B6R

Analysis of interatomic Contacts of Structural Units in PDB entry:
7B6R