Analysis of interatomic Contacts of Structural Units in PDB entry:
7B7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B7P entry

There are 2 chains in PDB entry 7B7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 42PRO 461
B
 GLU 42PRO 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7B7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 63Right-handed alpha
Helix 2
AA2
A
206 211Right-handed 310
Helix 3
AA3
A
225 245Right-handed alpha
Helix 4
AA4
A
269 271Right-handed 310
Helix 5
AA5
A
272 281Right-handed alpha
Helix 6
AA6
A
292 306Right-handed alpha
Helix 7
AA7
A
328 332Right-handed 310
Helix 8
AA8
A
363 365Right-handed 310
Helix 9
AA9
A
375 394Right-handed alpha
Helix 10
AB1
A
408 413Right-handed 310
Helix 11
AB2
A
414 424Right-handed alpha
Helix 12
AB3
A
436 460Right-handed alpha
Helix 13
AB4
B
44 63Right-handed alpha
Helix 14
AB5
B
206 211Right-handed 310
Helix 15
AB6
B
225 243Right-handed alpha
Helix 16
AB7
B
269 271Right-handed 310
Helix 17
AB8
B
272 281Right-handed alpha
Helix 18
AB9
B
292 306Right-handed alpha
Helix 19
AC1
B
328 332Right-handed 310
Helix 20
AC2
B
363 365Right-handed 310
Helix 21
AC3
B
375 394Right-handed alpha
Helix 22
AC4
B
408 413Right-handed 310
Helix 23
AC5
B
414 424Right-handed alpha
Helix 24
AC6
B
436 460Right-handed alpha
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There are 8 sheets in PDB entry 7B7P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
A
99 102anti-parallel
Strand 3
A
88 92anti-parallel
Strand 4
A
183 187anti-parallel
Strand 5
A
67 71anti-parallel
Strand 6
A
171 174parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 136first strand
Strand 2
A
139 147anti-parallel
Strand 3
A
159 165anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 267first strand
Strand 2
A
247 254anti-parallel
Strand 3
A
197 204parallel
Strand 4
A
311 318parallel
Strand 5
A
399 405parallel
Strand 6
A
428 434parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 326first strand
Strand 2
A
367 370anti-parallel
Strand 3
A
346 349anti-parallel
Strand 4
A
337 340anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 112first strand
Strand 2
B
99 105anti-parallel
Strand 3
B
88 92anti-parallel
Strand 4
B
183 187anti-parallel
Strand 5
B
67 71anti-parallel
Strand 6
B
171 174parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 136first strand
Strand 2
B
139 149anti-parallel
Strand 3
B
156 165anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 267first strand
Strand 2
B
247 254anti-parallel
Strand 3
B
197 204parallel
Strand 4
B
311 318parallel
Strand 5
B
399 405parallel
Strand 6
B
428 434parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 326first strand
Strand 2
B
367 370anti-parallel
Strand 3
B
346 349anti-parallel
Strand 4
B
337 340anti-parallel
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