Analysis of interatomic Contacts of Structural Units in PDB entry:
7B8P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7B8P entry

There are 3 chains in PDB entry 7B8P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 1023
B	MET 1	VAL 1023
C	MET 1	VAL 1023

There are117 helices in PDB entry 7B8P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	7	Right-handed alpha
Helix 2	AA2	A	8	27	Right-handed alpha
Helix 3	AA3	A	53	61	Right-handed alpha
Helix 4	AA4	A	61	70	Right-handed alpha
Helix 5	AA5	A	99	113	Right-handed alpha
Helix 6	AA6	A	119	124	Right-handed alpha
Helix 7	AA7	A	150	162	Right-handed alpha
Helix 8	AA8	A	162	168	Right-handed alpha
Helix 9	AA9	A	189	196	Right-handed alpha
Helix 10	AB1	A	199	211	Right-handed alpha
Helix 11	AB2	A	242	248	Right-handed alpha
Helix 12	AB3	A	262	265	Right-handed alpha
Helix 13	AB4	A	298	314	Right-handed alpha
Helix 14	AB5	A	315	317	Right-handed 310
Helix 15	AB6	A	329	360	Right-handed alpha
Helix 16	AB7	A	361	370	Right-handed alpha
Helix 17	AB8	A	370	387	Right-handed alpha
Helix 18	AB9	A	391	423	Right-handed alpha
Helix 19	AC1	A	426	453	Right-handed alpha
Helix 20	AC2	A	454	459	Right-handed 310
Helix 21	AC3	A	461	496	Right-handed alpha
Helix 22	AC4	A	512	534	Right-handed alpha
Helix 23	AC5	A	534	556	Right-handed alpha
Helix 24	AC6	A	580	595	Right-handed alpha
Helix 25	AC7	A	635	646	Right-handed alpha
Helix 26	AC8	A	683	698	Right-handed alpha
Helix 27	AC9	A	723	731	Right-handed alpha
Helix 28	AD1	A	733	747	Right-handed alpha
Helix 29	AD2	A	768	771	Right-handed 310
Helix 30	AD3	A	773	778	Right-handed alpha
Helix 31	AD4	A	827	841	Right-handed alpha
Helix 32	AD5	A	852	862	Right-handed alpha
Helix 33	AD6	A	863	884	Right-handed alpha
Helix 34	AD7	A	887	894	Right-handed alpha
Helix 35	AD8	A	895	911	Right-handed alpha
Helix 36	AD9	A	915	946	Right-handed alpha
Helix 37	AE1	A	949	982	Right-handed alpha
Helix 38	AE2	A	986	1007	Right-handed alpha
Helix 39	AE3	A	1010	1022	Right-handed alpha
Helix 40	AE4	B	2	7	Right-handed alpha
Helix 41	AE5	B	8	27	Right-handed alpha
Helix 42	AE6	B	53	61	Right-handed alpha
Helix 43	AE7	B	61	70	Right-handed alpha
Helix 44	AE8	B	99	113	Right-handed alpha
Helix 45	AE9	B	119	124	Right-handed alpha
Helix 46	AF1	B	150	162	Right-handed alpha
Helix 47	AF2	B	162	168	Right-handed alpha
Helix 48	AF3	B	189	196	Right-handed alpha
Helix 49	AF4	B	199	211	Right-handed alpha
Helix 50	AF5	B	242	248	Right-handed alpha
Helix 51	AF6	B	262	265	Right-handed alpha
Helix 52	AF7	B	298	314	Right-handed alpha
Helix 53	AF8	B	315	317	Right-handed 310
Helix 54	AF9	B	329	360	Right-handed alpha
Helix 55	AG1	B	361	370	Right-handed alpha
Helix 56	AG2	B	370	387	Right-handed alpha
Helix 57	AG3	B	391	423	Right-handed alpha
Helix 58	AG4	B	426	453	Right-handed alpha
Helix 59	AG5	B	454	459	Right-handed 310
Helix 60	AG6	B	461	496	Right-handed alpha
Helix 61	AG7	B	512	534	Right-handed alpha
Helix 62	AG8	B	534	556	Right-handed alpha
Helix 63	AG9	B	580	595	Right-handed alpha
Helix 64	AH1	B	635	646	Right-handed alpha
Helix 65	AH2	B	683	698	Right-handed alpha
Helix 66	AH3	B	723	731	Right-handed alpha
Helix 67	AH4	B	733	747	Right-handed alpha
Helix 68	AH5	B	768	771	Right-handed 310
Helix 69	AH6	B	773	778	Right-handed alpha
Helix 70	AH7	B	827	841	Right-handed alpha
Helix 71	AH8	B	852	862	Right-handed alpha
Helix 72	AH9	B	863	884	Right-handed alpha
Helix 73	AI1	B	887	894	Right-handed alpha
Helix 74	AI2	B	895	911	Right-handed alpha
Helix 75	AI3	B	915	946	Right-handed alpha
Helix 76	AI4	B	949	982	Right-handed alpha
Helix 77	AI5	B	986	1007	Right-handed alpha
Helix 78	AI6	B	1010	1022	Right-handed alpha
Helix 79	AI7	C	2	7	Right-handed alpha
Helix 80	AI8	C	8	27	Right-handed alpha
Helix 81	AI9	C	53	61	Right-handed alpha
Helix 82	AJ1	C	61	70	Right-handed alpha
Helix 83	AJ2	C	99	113	Right-handed alpha
Helix 84	AJ3	C	119	124	Right-handed alpha
Helix 85	AJ4	C	150	162	Right-handed alpha
Helix 86	AJ5	C	162	168	Right-handed alpha
Helix 87	AJ6	C	189	196	Right-handed alpha
Helix 88	AJ7	C	199	211	Right-handed alpha
Helix 89	AJ8	C	242	248	Right-handed alpha
Helix 90	AJ9	C	262	265	Right-handed alpha
Helix 91	AK1	C	298	314	Right-handed alpha
Helix 92	AK2	C	315	317	Right-handed 310
Helix 93	AK3	C	329	360	Right-handed alpha
Helix 94	AK4	C	361	370	Right-handed alpha
Helix 95	AK5	C	370	387	Right-handed alpha
Helix 96	AK6	C	391	423	Right-handed alpha
Helix 97	AK7	C	426	453	Right-handed alpha
Helix 98	AK8	C	454	459	Right-handed 310
Helix 99	AK9	C	461	496	Right-handed alpha
Helix 100	AL1	C	512	534	Right-handed alpha
Helix 101	AL2	C	534	556	Right-handed alpha
Helix 102	AL3	C	580	595	Right-handed alpha
Helix 103	AL4	C	635	646	Right-handed alpha
Helix 104	AL5	C	683	698	Right-handed alpha
Helix 105	AL6	C	723	731	Right-handed alpha
Helix 106	AL7	C	733	747	Right-handed alpha
Helix 107	AL8	C	768	771	Right-handed 310
Helix 108	AL9	C	773	778	Right-handed alpha
Helix 109	AM1	C	827	841	Right-handed alpha
Helix 110	AM2	C	852	862	Right-handed alpha
Helix 111	AM3	C	863	884	Right-handed alpha
Helix 112	AM4	C	887	894	Right-handed alpha
Helix 113	AM5	C	895	911	Right-handed alpha
Helix 114	AM6	C	915	946	Right-handed alpha
Helix 115	AM7	C	949	982	Right-handed alpha
Helix 116	AM8	C	986	1007	Right-handed alpha
Helix 117	AM9	C	1010	1022	Right-handed alpha

There are 24 sheets in PDB entry 7B8P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	132	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	83	anti-parallel
Strand 5	A	807	810	anti-parallel
Strand 6	A	813	822	anti-parallel
Strand 7	A	704	706	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	132	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	87	94	anti-parallel
Strand 4	A	75	83	anti-parallel
Strand 5	A	807	810	anti-parallel
Strand 6	A	813	822	anti-parallel
Strand 7	A	672	678	anti-parallel
Strand 8	A	846	850	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	177	first strand
Strand 2	A	284	293	anti-parallel
Strand 3	A	138	143	anti-parallel
Strand 4	A	322	324	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	177	first strand
Strand 2	A	284	293	anti-parallel
Strand 3	A	278	281	anti-parallel
Strand 4	A	601	608	anti-parallel
Strand 5	A	619	626	anti-parallel
Strand 6	A	570	574	anti-parallel
Strand 7	A	656	658	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	272	first strand
Strand 2	A	182	188	anti-parallel
Strand 3	A	758	766	parallel
Strand 4	A	749	755	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	235	first strand
Strand 2	C	715	722	parallel
Strand 3	C	796	803	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	252	first strand
Strand 2	A	259	261	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	796	803	first strand
Strand 2	A	715	722	anti-parallel
Strand 3	B	234	235	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	781	783	first strand
Strand 2	A	789	791	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	132	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	83	anti-parallel
Strand 5	B	807	810	anti-parallel
Strand 6	B	813	822	anti-parallel
Strand 7	B	704	706	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	132	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	87	94	anti-parallel
Strand 4	B	75	83	anti-parallel
Strand 5	B	807	810	anti-parallel
Strand 6	B	813	822	anti-parallel
Strand 7	B	672	678	anti-parallel
Strand 8	B	846	850	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	177	first strand
Strand 2	B	284	293	anti-parallel
Strand 3	B	138	143	anti-parallel
Strand 4	B	322	324	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	177	first strand
Strand 2	B	284	293	anti-parallel
Strand 3	B	278	281	anti-parallel
Strand 4	B	601	608	anti-parallel
Strand 5	B	619	626	anti-parallel
Strand 6	B	570	574	anti-parallel
Strand 7	B	656	658	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	272	first strand
Strand 2	B	182	188	anti-parallel
Strand 3	B	758	766	parallel
Strand 4	B	749	755	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	250	252	first strand
Strand 2	B	259	261	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	796	803	first strand
Strand 2	B	715	722	anti-parallel
Strand 3	C	234	235	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	781	783	first strand
Strand 2	B	789	791	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	132	first strand
Strand 2	C	42	48	anti-parallel
Strand 3	C	87	94	anti-parallel
Strand 4	C	75	83	anti-parallel
Strand 5	C	807	810	anti-parallel
Strand 6	C	813	822	anti-parallel
Strand 7	C	704	706	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	132	first strand
Strand 2	C	42	48	anti-parallel
Strand 3	C	87	94	anti-parallel
Strand 4	C	75	83	anti-parallel
Strand 5	C	807	810	anti-parallel
Strand 6	C	813	822	anti-parallel
Strand 7	C	672	678	anti-parallel
Strand 8	C	846	850	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	177	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	138	143	anti-parallel
Strand 4	C	322	324	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	177	first strand
Strand 2	C	284	293	anti-parallel
Strand 3	C	278	281	anti-parallel
Strand 4	C	601	608	anti-parallel
Strand 5	C	619	626	anti-parallel
Strand 6	C	570	574	anti-parallel
Strand 7	C	656	658	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	272	first strand
Strand 2	C	182	188	anti-parallel
Strand 3	C	758	766	parallel
Strand 4	C	749	755	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	252	first strand
Strand 2	C	259	261	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	781	783	first strand
Strand 2	C	789	791	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7B8P

Analysis of interatomic Contacts of Structural Units in PDB entry:
7B8P