Analysis of interatomic Contacts of Structural Units in PDB entry:
7B96

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7B96 entry

There are 2 chains in PDB entry 7B96 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 465	GLN 744
B	GLY 465	GLN 744

There are 3 helices in PDB entry 7B96. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	732	735	Right-handed 310
Helix 2	AA2	B	642	644	Right-handed 310
Helix 3	AA3	B	732	735	Right-handed 310

There are 17 sheets in PDB entry 7B96. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	472	476	first strand
Strand 2	A	736	740	anti-parallel
Strand 3	A	727	731	anti-parallel
Strand 4	A	719	721	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	479	first strand
Strand 2	A	485	486	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	489	494	first strand
Strand 2	A	499	504	anti-parallel
Strand 3	A	509	514	anti-parallel
Strand 4	A	519	523	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	536	541	first strand
Strand 2	A	547	551	anti-parallel
Strand 3	A	556	560	anti-parallel
Strand 4	A	566	570	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	578	583	first strand
Strand 2	A	589	593	anti-parallel
Strand 3	A	598	602	anti-parallel
Strand 4	A	608	612	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	614	615	first strand
Strand 2	A	621	622	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	625	630	first strand
Strand 2	A	636	640	anti-parallel
Strand 3	A	645	649	anti-parallel
Strand 4	A	655	659	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	661	662	first strand
Strand 2	A	668	669	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	672	677	first strand
Strand 2	A	683	687	anti-parallel
Strand 3	A	692	696	anti-parallel
Strand 4	A	702	705	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	472	476	first strand
Strand 2	B	736	740	anti-parallel
Strand 3	B	727	731	anti-parallel
Strand 4	B	719	721	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	478	479	first strand
Strand 2	B	485	486	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	494	first strand
Strand 2	B	499	504	anti-parallel
Strand 3	B	509	514	anti-parallel
Strand 4	B	519	523	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	536	541	first strand
Strand 2	B	547	551	anti-parallel
Strand 3	B	556	560	anti-parallel
Strand 4	B	566	570	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	578	583	first strand
Strand 2	B	589	593	anti-parallel
Strand 3	B	598	602	anti-parallel
Strand 4	B	608	612	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	625	630	first strand
Strand 2	B	636	640	anti-parallel
Strand 3	B	645	649	anti-parallel
Strand 4	B	655	659	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	661	662	first strand
Strand 2	B	668	669	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	672	677	first strand
Strand 2	B	683	687	anti-parallel
Strand 3	B	692	696	anti-parallel
Strand 4	B	702	705	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7B96

Analysis of interatomic Contacts of Structural Units in PDB entry:
7B96