Analysis of interatomic Contacts of Structural Units in PDB entry:
7B97


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B97 entry

There are 2 chains in PDB entry 7B97 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 629
B
 MET 1GLN 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 68 helices in PDB entry 7B97. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 21Right-handed alpha
Helix 2
AA2
A
25 36Right-handed alpha
Helix 3
AA3
A
38 44Right-handed alpha
Helix 4
AA4
A
58 62Right-handed 310
Helix 5
AA5
A
71 107Right-handed alpha
Helix 6
AA6
A
116 127Right-handed alpha
Helix 7
AA7
A
134 152Right-handed alpha
Helix 8
AA8
A
159 165Right-handed alpha
Helix 9
AA9
A
166 177Right-handed alpha
Helix 10
AB1
A
182 195Right-handed alpha
Helix 11
AB2
A
201 220Right-handed alpha
Helix 12
AB3
A
220 233Right-handed alpha
Helix 13
AB4
A
243 247Right-handed 310
Helix 14
AB5
A
261 272Right-handed alpha
Helix 15
AB6
A
273 283Right-handed alpha
Helix 16
AB7
A
294 304Right-handed alpha
Helix 17
AB8
A
316 318Right-handed 310
Helix 18
AB9
A
319 325Right-handed alpha
Helix 19
AC1
A
342 351Right-handed alpha
Helix 20
AC2
A
373 375Right-handed 310
Helix 21
AC3
A
376 395Right-handed alpha
Helix 22
AC4
A
416 424Right-handed alpha
Helix 23
AC5
A
428 437Right-handed alpha
Helix 24
AC6
A
458 471Right-handed alpha
Helix 25
AC7
A
480 488Right-handed alpha
Helix 26
AC8
A
492 499Right-handed 310
Helix 27
AC9
A
500 511Right-handed alpha
Helix 28
AD1
A
520 522Right-handed 310
Helix 29
AD2
A
523 539Right-handed alpha
Helix 30
AD3
A
541 545Right-handed 310
Helix 31
AD4
A
556 569Right-handed alpha
Helix 32
AD5
A
584 593Right-handed alpha
Helix 33
AD6
A
594 598Right-handed 310
Helix 34
AD7
A
608 628Right-handed alpha
Helix 35
AD8
B
8 21Right-handed alpha
Helix 36
AD9
B
25 34Right-handed alpha
Helix 37
AE1
B
38 44Right-handed alpha
Helix 38
AE2
B
58 62Right-handed 310
Helix 39
AE3
B
71 107Right-handed alpha
Helix 40
AE4
B
116 127Right-handed alpha
Helix 41
AE5
B
134 152Right-handed alpha
Helix 42
AE6
B
159 165Right-handed alpha
Helix 43
AE7
B
166 177Right-handed alpha
Helix 44
AE8
B
182 195Right-handed alpha
Helix 45
AE9
B
201 220Right-handed alpha
Helix 46
AF1
B
220 233Right-handed alpha
Helix 47
AF2
B
243 247Right-handed 310
Helix 48
AF3
B
261 272Right-handed alpha
Helix 49
AF4
B
273 283Right-handed alpha
Helix 50
AF5
B
294 304Right-handed alpha
Helix 51
AF6
B
316 318Right-handed 310
Helix 52
AF7
B
319 325Right-handed alpha
Helix 53
AF8
B
342 351Right-handed alpha
Helix 54
AF9
B
373 375Right-handed 310
Helix 55
AG1
B
376 395Right-handed alpha
Helix 56
AG2
B
416 424Right-handed alpha
Helix 57
AG3
B
428 437Right-handed alpha
Helix 58
AG4
B
458 471Right-handed alpha
Helix 59
AG5
B
480 488Right-handed alpha
Helix 60
AG6
B
492 499Right-handed 310
Helix 61
AG7
B
500 511Right-handed alpha
Helix 62
AG8
B
520 522Right-handed 310
Helix 63
AG9
B
523 539Right-handed alpha
Helix 64
AH1
B
541 545Right-handed 310
Helix 65
AH2
B
556 569Right-handed alpha
Helix 66
AH3
B
584 593Right-handed alpha
Helix 67
AH4
B
594 598Right-handed 310
Helix 68
AH5
B
608 628Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 7B97. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
55 56anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 242first strand
Strand 2
A
409 413anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 313first strand
Strand 2
A
288 293parallel
Strand 3
A
252 258parallel
Strand 4
A
331 334parallel
Strand 5
A
353 356parallel
Strand 6
A
368 369parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
515 519first strand
Strand 2
A
473 479parallel
Strand 3
A
442 448parallel
Strand 4
A
547 551parallel
Strand 5
A
572 575parallel
Strand 6
A
602 604parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 47first strand
Strand 2
B
55 56anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 242first strand
Strand 2
B
409 413anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
310 313first strand
Strand 2
B
288 293parallel
Strand 3
B
252 258parallel
Strand 4
B
331 334parallel
Strand 5
B
353 356parallel
Strand 6
B
368 369parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
515 519first strand
Strand 2
B
473 479parallel
Strand 3
B
442 448parallel
Strand 4
B
547 551parallel
Strand 5
B
572 575parallel
Strand 6
B
602 604parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il