Analysis of interatomic Contacts of Structural Units in PDB entry:
7BB6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BB6 entry

There are 6 chains in PDB entry 7BB6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 33LEU 340
C
 SER 2ASN 340
E
 ASP 11LEU 394
F
 SER 8LYS 64
H
 CYS 1GLY 9
B
 GLN 1SER 128
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7BB6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 62Right-handed alpha
Helix 2
AA2
A
75 102Right-handed alpha
Helix 3
AA3
A
113 143Right-handed alpha
Helix 4
AA4
A
158 178Right-handed alpha
Helix 5
AA5
A
206 216Right-handed alpha
Helix 6
AA6
A
216 232Right-handed alpha
Helix 7
AA7
A
266 292Right-handed alpha
Helix 8
AA8
A
307 327Right-handed alpha
Helix 9
AA9
A
331 340Right-handed alpha
Helix 10
AB1
C
3 25Right-handed alpha
Helix 11
AB2
C
30 35Right-handed alpha
Helix 12
AB3
E
12 39Right-handed alpha
Helix 13
AB4
E
234 238Right-handed 310
Helix 14
AB5
E
265 277Right-handed alpha
Helix 15
AB6
E
293 304Right-handed alpha
Helix 16
AB7
E
306 312Right-handed alpha
Helix 17
AB8
E
313 318Right-handed alpha
Helix 18
AB9
E
331 352Right-handed alpha
Helix 19
AC1
E
370 392Right-handed alpha
Helix 20
AC2
F
9 22Right-handed alpha
Helix 21
AC3
F
29 45Right-handed alpha
Helix 22
AC4
B
28 32Right-handed 310
Helix 23
AC5
B
87 91Right-handed 310
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There are 10 sheets in PDB entry 7BB6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 186first strand
Strand 2
A
189 192anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 51first strand
Strand 2
C
335 340anti-parallel
Strand 3
C
327 331anti-parallel
Strand 4
C
315 320anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 104first strand
Strand 2
C
111 116anti-parallel
Strand 3
C
121 125anti-parallel
Strand 4
C
135 139anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 153first strand
Strand 2
C
156 161anti-parallel
Strand 3
C
167 170anti-parallel
Strand 4
C
175 179anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
190 192first strand
Strand 2
C
198 201anti-parallel
Strand 3
C
209 212anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
242 243first strand
Strand 2
C
251 252anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
273 276first strand
Strand 2
C
284 289anti-parallel
Strand 3
C
295 298anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
212 214first strand
Strand 2
E
217 219anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 7first strand
Strand 2
B
17 23anti-parallel
Strand 3
B
78 84anti-parallel
Strand 4
B
68 71anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 51first strand
Strand 2
B
34 40anti-parallel
Strand 3
B
92 98anti-parallel
Strand 4
B
122 124anti-parallel
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