Analysis of interatomic Contacts of Structural Units in PDB entry:
7BBL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BBL entry

There are 6 chains in PDB entry 7BBL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2PHE 86
C
 SER 2PHE 86
D
 MET 45PRO 131
E
 HIS 189CYS 227
B
 ALA 47PRO 131
F
 GLU 191CYS 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7BBL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 14Right-handed alpha
Helix 2
AA2
A
75 84Right-handed alpha
Helix 3
AA3
C
8 15Right-handed alpha
Helix 4
AA4
C
75 84Right-handed alpha
Helix 5
AA5
D
50 72Right-handed alpha
Helix 6
AA6
D
120 122Right-handed 310
Helix 7
AA7
E
194 206Right-handed alpha
Helix 8
AA8
E
208 226Right-handed alpha
Helix 9
AA9
B
50 72Right-handed alpha
Helix 10
AB1
B
120 122Right-handed 310
Helix 11
AB2
F
194 206Right-handed alpha
Helix 12
AB3
F
208 227Right-handed alpha
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There are 2 sheets in PDB entry 7BBL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 72first strand
Strand 2
A
19 24anti-parallel
Strand 3
A
28 37anti-parallel
Strand 4
A
44 49anti-parallel
Strand 5
A
55 60anti-parallel
Strand 6
B
124 129anti-parallel
Strand 7
B
77 82anti-parallel
Strand 8
B
87 95anti-parallel
Strand 9
B
102 108anti-parallel
Strand 10
B
113 119anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 72first strand
Strand 2
C
19 24anti-parallel
Strand 3
C
28 37anti-parallel
Strand 4
C
44 49anti-parallel
Strand 5
C
55 60anti-parallel
Strand 6
D
124 129anti-parallel
Strand 7
D
77 82anti-parallel
Strand 8
D
87 95anti-parallel
Strand 9
D
102 109anti-parallel
Strand 10
D
112 119anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il