Analysis of interatomic Contacts of Structural Units in PDB entry:
7BBS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BBS entry

There are 2 chains in PDB entry 7BBS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 17PRO 484
B
 SER 17PRO 484
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 7BBS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 36Right-handed alpha
Helix 2
AA2
A
40 44Right-handed 310
Helix 3
AA3
A
47 54Right-handed alpha
Helix 4
AA4
A
59 63Right-handed 310
Helix 5
AA5
A
70 85Right-handed alpha
Helix 6
AA6
A
95 100Right-handed alpha
Helix 7
AA7
A
101 104Right-handed 310
Helix 8
AA8
A
108 125Right-handed alpha
Helix 9
AA9
A
139 144Right-handed alpha
Helix 10
AB1
A
145 150Right-handed 310
Helix 11
AB2
A
151 169Right-handed alpha
Helix 12
AB3
A
180 190Right-handed alpha
Helix 13
AB4
A
200 224Right-handed alpha
Helix 14
AB5
A
247 262Right-handed alpha
Helix 15
AB6
A
262 271Right-handed alpha
Helix 16
AB7
A
275 283Right-handed alpha
Helix 17
AB8
A
287 292Right-handed alpha
Helix 18
AB9
A
295 301Right-handed alpha
Helix 19
AC1
A
367 381Right-handed alpha
Helix 20
AC2
A
407 427Right-handed alpha
Helix 21
AC3
A
444 448Right-handed 310
Helix 22
AC4
A
468 481Right-handed alpha
Helix 23
AC5
B
31 36Right-handed alpha
Helix 24
AC6
B
40 44Right-handed 310
Helix 25
AC7
B
47 54Right-handed alpha
Helix 26
AC8
B
59 63Right-handed 310
Helix 27
AC9
B
70 85Right-handed alpha
Helix 28
AD1
B
95 100Right-handed alpha
Helix 29
AD2
B
101 104Right-handed 310
Helix 30
AD3
B
108 125Right-handed alpha
Helix 31
AD4
B
139 144Right-handed alpha
Helix 32
AD5
B
145 150Right-handed 310
Helix 33
AD6
B
151 169Right-handed alpha
Helix 34
AD7
B
180 190Right-handed alpha
Helix 35
AD8
B
200 224Right-handed alpha
Helix 36
AD9
B
247 262Right-handed alpha
Helix 37
AE1
B
262 271Right-handed alpha
Helix 38
AE2
B
275 283Right-handed alpha
Helix 39
AE3
B
287 292Right-handed alpha
Helix 40
AE4
B
295 301Right-handed alpha
Helix 41
AE5
B
367 381Right-handed alpha
Helix 42
AE6
B
407 427Right-handed alpha
Helix 43
AE7
B
444 448Right-handed 310
Helix 44
AE8
B
468 481Right-handed alpha
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There are 9 sheets in PDB entry 7BBS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
482 483anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 29first strand
Strand 2
A
89 93parallel
Strand 3
A
128 134parallel
Strand 4
A
174 179parallel
Strand 5
A
231 236parallel
Strand 6
A
306 310parallel
Strand 7
A
386 390parallel
Strand 8
A
431 437parallel
Strand 9
A
25 29parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 243first strand
Strand 2
A
315 319parallel
Strand 3
A
349 352anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 358first strand
Strand 2
A
364 365anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 458first strand
Strand 2
A
465 467anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 19first strand
Strand 2
B
482 483anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 29first strand
Strand 2
B
89 93parallel
Strand 3
B
128 134parallel
Strand 4
B
174 179parallel
Strand 5
B
231 236parallel
Strand 6
B
306 310parallel
Strand 7
B
386 390parallel
Strand 8
B
431 437parallel
Strand 9
B
25 29parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 243first strand
Strand 2
B
315 319parallel
Strand 3
B
349 352anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
456 458first strand
Strand 2
B
465 467anti-parallel
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