Analysis of interatomic Contacts of Structural Units in PDB entry:
7BBU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BBU entry

There is 1 chain in PDB entry 7BBU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1012TYR 1512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7BBU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1023 1035Right-handed alpha
Helix 2
AA2
A
1050 1070Right-handed alpha
Helix 3
AA3
A
1083 1089Right-handed alpha
Helix 4
AA4
A
1122 1134Right-handed alpha
Helix 5
AA5
A
1136 1140Right-handed 310
Helix 6
AA6
A
1178 1200Right-handed alpha
Helix 7
AA7
A
1246 1253Right-handed alpha
Helix 8
AA8
A
1277 1288Right-handed alpha
Helix 9
AA9
A
1317 1337Right-handed alpha
Helix 10
AB1
A
1350 1362Right-handed alpha
Helix 11
AB2
A
1370 1376Right-handed alpha
Helix 12
AB3
A
1396 1423Right-handed alpha
Helix 13
AB4
A
1429 1439Right-handed alpha
Helix 14
AB5
A
1450 1463Right-handed alpha
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There are 5 sheets in PDB entry 7BBU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1038 1040first strand
Strand 2
A
1047 1049anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1074 1075first strand
Strand 2
A
1142 1151parallel
Strand 3
A
1166 1176anti-parallel
Strand 4
A
1269 1276anti-parallel
Strand 5
A
1234 1245anti-parallel
Strand 6
A
1221 1229anti-parallel
Strand 7
A
1206 1209anti-parallel
Strand 8
A
1477 1482anti-parallel
Strand 9
A
1504 1509anti-parallel
Strand 10
A
1442 1447anti-parallel
Strand 11
A
1424 1426parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1081 1082first strand
Strand 2
A
1110 1118anti-parallel
Strand 3
A
1103 1107anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1255 1257first strand
Strand 2
A
1265 1267anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1341 1343first strand
Strand 2
A
1304 1308parallel
Strand 3
A
1365 1369parallel
Strand 4
A
1378 1383anti-parallel
Strand 5
A
1389 1393anti-parallel
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