Analysis of interatomic Contacts of Structural Units in PDB entry:
7BBV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BBV entry

There are 2 chains in PDB entry 7BBV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 19PHE 316
B
 ALA 19PHE 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7BBV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 32Right-handed 310
Helix 2
AA2
A
49 59Right-handed alpha
Helix 3
AA3
A
117 121Right-handed 310
Helix 4
AA4
A
185 190Right-handed alpha
Helix 5
AA5
A
286 290Right-handed 310
Helix 6
AA6
A
298 300Right-handed 310
Helix 7
AA7
A
301 307Right-handed alpha
Helix 8
AA8
B
28 32Right-handed 310
Helix 9
AA9
B
49 58Right-handed alpha
Helix 10
AB1
B
117 121Right-handed 310
Helix 11
AB2
B
185 190Right-handed alpha
Helix 12
AB3
B
286 290Right-handed 310
Helix 13
AB4
B
301 307Right-handed alpha
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There are 6 sheets in PDB entry 7BBV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 17 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 47first strand
Strand 2
A
63 67parallel
Strand 3
A
83 87parallel
Strand 4
A
104 109parallel
Strand 5
A
130 135parallel
Strand 6
A
161 166parallel
Strand 7
A
194 198parallel
Strand 8
A
216 220parallel
Strand 9
A
239 248parallel
Strand 10
A
223 225parallel
Strand 11
A
201 207parallel
Strand 12
A
169 175parallel
Strand 13
A
138 140parallel
Strand 14
A
112 114parallel
Strand 15
A
92 101parallel
Strand 16
A
124 127parallel
Strand 17
A
154 157parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 79first strand
Strand 2
A
92 101parallel
Strand 3
A
112 114parallel
Strand 4
A
138 140parallel
Strand 5
A
169 175parallel
Strand 6
A
201 207parallel
Strand 7
A
223 225parallel
Strand 8
A
239 248parallel
Strand 9
A
265 272parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 179first strand
Strand 2
A
211 213parallel
Strand 3
A
232 235parallel
Strand 4
A
253 256parallel
Strand 5
A
277 278parallel
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There are 17 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 47first strand
Strand 2
B
63 67parallel
Strand 3
B
83 87parallel
Strand 4
B
104 109parallel
Strand 5
B
130 135parallel
Strand 6
B
161 166parallel
Strand 7
B
194 198parallel
Strand 8
B
216 220parallel
Strand 9
B
239 248parallel
Strand 10
B
223 225parallel
Strand 11
B
201 207parallel
Strand 12
B
169 175parallel
Strand 13
B
138 140parallel
Strand 14
B
112 114parallel
Strand 15
B
92 101parallel
Strand 16
B
124 127parallel
Strand 17
B
154 157parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 78first strand
Strand 2
B
92 101parallel
Strand 3
B
112 114parallel
Strand 4
B
138 140parallel
Strand 5
B
169 175parallel
Strand 6
B
201 207parallel
Strand 7
B
223 225parallel
Strand 8
B
239 248parallel
Strand 9
B
265 272parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 179first strand
Strand 2
B
211 213parallel
Strand 3
B
232 235parallel
Strand 4
B
253 256parallel
Strand 5
B
277 278parallel
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