Analysis of interatomic Contacts of Structural Units in PDB entry:
7BC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BC1 entry

There is 1 chain in PDB entry 7BC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7BC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 42Right-handed alpha
Helix 2
AA2
A
53 58Right-handed alpha
Helix 3
AA3
A
58 69Right-handed alpha
Helix 4
AA4
A
73 77Right-handed 310
Helix 5
AA5
A
103 119Right-handed alpha
Helix 6
AA6
A
136 150Right-handed alpha
Helix 7
AA7
A
162 172Right-handed alpha
Helix 8
AA8
A
189 193Right-handed 310
Helix 9
AA9
A
195 204Right-handed alpha
Helix 10
AB1
A
213 220Right-handed 310
Helix 11
AB2
A
223 238Right-handed alpha
Helix 12
AB3
A
240 251Right-handed alpha
Helix 13
AB4
A
264 270Right-handed alpha
Helix 14
AB5
A
271 277Right-handed 310
Helix 15
AB6
A
280 293Right-handed alpha
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There are 3 sheets in PDB entry 7BC1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
10 13anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
47 49parallel
Strand 3
A
78 83parallel
Strand 4
A
123 128parallel
Strand 5
A
153 159parallel
Strand 6
A
180 183parallel
Strand 7
A
207 210parallel
Strand 8
A
257 260parallel
Strand 9
A
16 18parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 86first strand
Strand 2
A
99 100anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il