Analysis of interatomic Contacts of Structural Units in PDB entry:
7BC6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BC6 entry

There are 2 chains in PDB entry 7BC6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 26ASN 457
B
 VAL 2SER 118
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 7BC6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 59Right-handed alpha
Helix 2
AA2
A
80 120Right-handed alpha
Helix 3
AA3
A
121 146Right-handed alpha
Helix 4
AA4
A
149 162Right-handed alpha
Helix 5
AA5
A
164 178Right-handed alpha
Helix 6
AA6
A
184 207Right-handed alpha
Helix 7
AA7
A
207 212Right-handed alpha
Helix 8
AA8
A
217 219Right-handed 310
Helix 9
AA9
A
220 238Right-handed alpha
Helix 10
AB1
A
256 264Right-handed alpha
Helix 11
AB2
A
272 301Right-handed alpha
Helix 12
AB3
A
308 334Right-handed alpha
Helix 13
AB4
A
340 359Right-handed alpha
Helix 14
AB5
A
362 373Right-handed alpha
Helix 15
AB6
A
374 378Right-handed 310
Helix 16
AB7
A
379 389Right-handed alpha
Helix 17
AB8
A
395 425Right-handed alpha
Helix 18
AB9
A
431 441Right-handed alpha
Helix 19
AC1
A
441 457Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7BC6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 6first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
68 71anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 60first strand
Strand 2
B
49 51anti-parallel
Strand 3
B
34 38anti-parallel
Strand 4
B
94 95anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il