Analysis of interatomic Contacts of Structural Units in PDB entry:
7BCR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BCR entry

There is 1 chain in PDB entry 7BCR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 30SER 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7BCR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 63Right-handed alpha
Helix 2
AA2
A
79 90Right-handed alpha
Helix 3
AA3
A
100 105Right-handed 310
Helix 4
AA4
A
106 114Right-handed 310
Helix 5
AA5
A
120 129Right-handed alpha
Helix 6
AA6
A
130 138Right-handed alpha
Helix 7
AA7
A
139 143Right-handed 310
Helix 8
AA8
A
167 172Right-handed 310
Helix 9
AA9
A
181 191Right-handed alpha
Helix 10
AB1
A
199 201Right-handed 310
Helix 11
AB2
A
202 209Right-handed alpha
Helix 12
AB3
A
218 225Right-handed alpha
Helix 13
AB4
A
226 231Right-handed 310
Helix 14
AB5
A
250 255Right-handed alpha
Helix 15
AB6
A
257 293Right-handed alpha
Helix 16
AB7
A
301 324Right-handed alpha
Helix 17
AB8
A
324 339Right-handed alpha
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There are 4 sheets in PDB entry 7BCR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 39first strand
Strand 2
A
67 72parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 98first strand
Strand 2
A
241 249anti-parallel
Strand 3
A
145 155anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
A
157 160anti-parallel
Strand 3
A
233 235anti-parallel
Strand 4
A
296 298parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 178first strand
Strand 2
A
194 197parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il