Analysis of interatomic Contacts of Structural Units in PDB entry:
7BCW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BCW entry

There are 2 chains in PDB entry 7BCW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 6GLN 579
B
 ASP 6GLN 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 48 helices in PDB entry 7BCW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 21Right-handed alpha
Helix 2
AA2
A
24 46Right-handed alpha
Helix 3
AA3
A
49 54Right-handed alpha
Helix 4
AA4
A
66 109Right-handed alpha
Helix 5
AA5
A
112 117Right-handed alpha
Helix 6
AA6
A
120 130Right-handed alpha
Helix 7
AA7
A
130 141Right-handed alpha
Helix 8
AA8
A
141 164Right-handed alpha
Helix 9
AA9
A
169 213Right-handed alpha
Helix 10
AB1
A
213 220Right-handed alpha
Helix 11
AB2
A
222 271Right-handed alpha
Helix 12
AB3
A
272 277Right-handed alpha
Helix 13
AB4
A
280 323Right-handed alpha
Helix 14
AB5
A
382 389Right-handed alpha
Helix 15
AB6
A
411 417Right-handed alpha
Helix 16
AB7
A
432 438Right-handed alpha
Helix 17
AB8
A
446 457Right-handed alpha
Helix 18
AB9
A
459 464Right-handed alpha
Helix 19
AC1
A
468 472Right-handed 310
Helix 20
AC2
A
482 487Right-handed alpha
Helix 21
AC3
A
488 497Right-handed alpha
Helix 22
AC4
A
512 527Right-handed alpha
Helix 23
AC5
A
561 567Right-handed alpha
Helix 24
AC6
A
570 577Right-handed alpha
Helix 25
AC7
B
8 21Right-handed alpha
Helix 26
AC8
B
24 47Right-handed alpha
Helix 27
AC9
B
49 54Right-handed alpha
Helix 28
AD1
B
58 62Right-handed 310
Helix 29
AD2
B
66 109Right-handed alpha
Helix 30
AD3
B
112 117Right-handed alpha
Helix 31
AD4
B
120 141Right-handed alpha
Helix 32
AD5
B
141 164Right-handed alpha
Helix 33
AD6
B
169 212Right-handed alpha
Helix 34
AD7
B
213 221Right-handed alpha
Helix 35
AD8
B
222 271Right-handed alpha
Helix 36
AD9
B
282 323Right-handed alpha
Helix 37
AE1
B
382 391Right-handed alpha
Helix 38
AE2
B
415 417Right-handed 310
Helix 39
AE3
B
432 438Right-handed alpha
Helix 40
AE4
B
446 457Right-handed alpha
Helix 41
AE5
B
459 464Right-handed alpha
Helix 42
AE6
B
468 472Right-handed 310
Helix 43
AE7
B
475 479Right-handed 310
Helix 44
AE8
B
482 497Right-handed alpha
Helix 45
AE9
B
512 524Right-handed alpha
Helix 46
AF1
B
525 529Right-handed 310
Helix 47
AF2
B
561 569Right-handed alpha
Helix 48
AF3
B
570 578Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 7BCW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
342 348anti-parallel
Strand 3
A
397 402anti-parallel
Strand 4
A
405 406anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 422first strand
Strand 2
A
501 505parallel
Strand 3
A
531 535parallel
Strand 4
A
371 376parallel
Strand 5
A
547 552parallel
Strand 6
A
555 560anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 362first strand
Strand 2
B
342 349anti-parallel
Strand 3
B
365 366anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 362first strand
Strand 2
B
342 349anti-parallel
Strand 3
B
397 402anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 422first strand
Strand 2
B
501 505parallel
Strand 3
B
531 535parallel
Strand 4
B
371 375parallel
Strand 5
B
547 551parallel
Strand 6
B
556 560anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il