Analysis of interatomic Contacts of Structural Units in PDB entry:
7BEE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BEE entry

There are 8 chains in PDB entry 7BEE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 35ASP 412
B
 MET 35MET 414
C
 PRO 1PRO 20
D
 PRO 1PRO 19
E
 PRO 1PRO 19
F
 PRO 1GLY 21
G
 PRO 1PRO 19
H
 PRO 1GLY 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7BEE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 60Right-handed alpha
Helix 2
AA2
A
70 85Right-handed alpha
Helix 3
AA3
A
86 97Right-handed alpha
Helix 4
AA4
A
103 119Right-handed alpha
Helix 5
AA5
A
143 155Right-handed alpha
Helix 6
AA6
A
165 181Right-handed alpha
Helix 7
AA7
A
261 263Right-handed 310
Helix 8
AA8
A
278 285Right-handed alpha
Helix 9
AA9
A
286 297Right-handed alpha
Helix 10
AB1
A
317 324Right-handed alpha
Helix 11
AB2
A
337 342Right-handed alpha
Helix 12
AB3
B
37 60Right-handed alpha
Helix 13
AB4
B
70 85Right-handed alpha
Helix 14
AB5
B
86 97Right-handed alpha
Helix 15
AB6
B
103 119Right-handed alpha
Helix 16
AB7
B
143 155Right-handed alpha
Helix 17
AB8
B
165 181Right-handed alpha
Helix 18
AB9
B
261 263Right-handed 310
Helix 19
AC1
B
278 285Right-handed alpha
Helix 20
AC2
B
286 297Right-handed alpha
Helix 21
AC3
B
317 324Right-handed alpha
Helix 22
AC4
B
337 342Right-handed alpha
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There are 5 sheets in PDB entry 7BEE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 69first strand
Strand 2
A
400 406anti-parallel
Strand 3
A
388 394anti-parallel
Strand 4
A
265 272anti-parallel
Strand 5
A
253 259anti-parallel
Strand 6
A
231 248anti-parallel
Strand 7
A
298 316anti-parallel
Strand 8
A
219 225first strand
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 161first strand
Strand 2
A
127 137parallel
Strand 3
A
198 207anti-parallel
Strand 4
A
348 359parallel
Strand 5
A
298 316anti-parallel
Strand 6
A
231 248anti-parallel
Strand 7
A
380 383first strand
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
400 406anti-parallel
Strand 3
B
388 394anti-parallel
Strand 4
B
265 272anti-parallel
Strand 5
B
253 259anti-parallel
Strand 6
B
230 248anti-parallel
Strand 7
B
219 227anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
400 406anti-parallel
Strand 3
B
388 394anti-parallel
Strand 4
B
265 272anti-parallel
Strand 5
B
253 259anti-parallel
Strand 6
B
230 248anti-parallel
Strand 7
B
298 307anti-parallel
Strand 8
B
380 383parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 161first strand
Strand 2
B
127 137parallel
Strand 3
B
198 207anti-parallel
Strand 4
B
348 359parallel
Strand 5
B
309 316anti-parallel
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