Analysis of interatomic Contacts of Structural Units in PDB entry:
7BEF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BEF entry

There are 9 chains in PDB entry 7BEF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 6	PRO 323
B	THR 6	ASP 233
C	TYR 3	GLU 1342
D	GLU 15	GLY 1376
E	ALA 2	ARG 91
F	ALA 79	ASP 613
G	THR 2	GLU 107
T	A -15	A 57
N	T -57	T 15

There are137 helices in PDB entry 7BEF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	50	Right-handed alpha
Helix 2	AA2	A	77	87	Right-handed alpha
Helix 3	AA3	A	113	115	Right-handed 310
Helix 4	AA4	A	154	162	Right-handed alpha
Helix 5	AA5	A	212	233	Right-handed alpha
Helix 6	AA6	A	264	269	Right-handed alpha
Helix 7	AA7	A	270	273	Right-handed 310
Helix 8	AA8	A	277	284	Right-handed alpha
Helix 9	AA9	A	285	290	Right-handed alpha
Helix 10	AB1	A	298	308	Right-handed alpha
Helix 11	AB2	A	309	311	Right-handed 310
Helix 12	AB3	B	35	50	Right-handed alpha
Helix 13	AB4	B	77	88	Right-handed alpha
Helix 14	AB5	B	154	161	Right-handed alpha
Helix 15	AB6	B	212	233	Right-handed alpha
Helix 16	AB7	C	4	10	Right-handed alpha
Helix 17	AB8	C	28	40	Right-handed alpha
Helix 18	AB9	C	48	57	Right-handed alpha
Helix 19	AC1	C	81	89	Right-handed alpha
Helix 20	AC2	C	207	213	Right-handed alpha
Helix 21	AC3	C	216	225	Right-handed alpha
Helix 22	AC4	C	270	280	Right-handed alpha
Helix 23	AC5	C	288	293	Right-handed alpha
Helix 24	AC6	C	318	329	Right-handed alpha
Helix 25	AC7	C	345	354	Right-handed alpha
Helix 26	AC8	C	358	371	Right-handed alpha
Helix 27	AC9	C	377	389	Right-handed alpha
Helix 28	AD1	C	398	409	Right-handed alpha
Helix 29	AD2	C	423	438	Right-handed alpha
Helix 30	AD3	C	455	480	Right-handed alpha
Helix 31	AD4	C	495	509	Right-handed alpha
Helix 32	AD5	C	519	528	Right-handed alpha
Helix 33	AD6	C	551	555	Right-handed 310
Helix 34	AD7	C	565	569	Right-handed 310
Helix 35	AD8	C	607	612	Right-handed alpha
Helix 36	AD9	C	662	667	Right-handed alpha
Helix 37	AE1	C	675	688	Right-handed alpha
Helix 38	AE2	C	704	712	Right-handed alpha
Helix 39	AE3	C	820	825	Right-handed alpha
Helix 40	AE4	C	858	863	Right-handed alpha
Helix 41	AE5	C	896	907	Right-handed alpha
Helix 42	AE6	C	944	956	Right-handed alpha
Helix 43	AE7	C	958	983	Right-handed alpha
Helix 44	AE8	C	993	997	Right-handed 310
Helix 45	AE9	C	1005	1039	Right-handed alpha
Helix 46	AF1	C	1103	1107	Right-handed 310
Helix 47	AF2	C	1110	1133	Right-handed alpha
Helix 48	AF3	C	1137	1150	Right-handed alpha
Helix 49	AF4	C	1165	1177	Right-handed alpha
Helix 50	AF5	C	1191	1202	Right-handed alpha
Helix 51	AF6	C	1238	1243	Right-handed alpha
Helix 52	AF7	C	1271	1281	Right-handed alpha
Helix 53	AF8	C	1284	1292	Right-handed alpha
Helix 54	AF9	C	1297	1310	Right-handed alpha
Helix 55	AG1	C	1320	1333	Right-handed alpha
Helix 56	AG2	D	26	34	Right-handed alpha
Helix 57	AG3	D	58	63	Right-handed alpha
Helix 58	AG4	D	94	101	Right-handed 310
Helix 59	AG5	D	113	118	Right-handed alpha
Helix 60	AG6	D	122	129	Right-handed alpha
Helix 61	AG7	D	131	140	Right-handed alpha
Helix 62	AG8	D	161	170	Right-handed alpha
Helix 63	AG9	D	181	192	Right-handed alpha
Helix 64	AH1	D	193	208	Right-handed alpha
Helix 65	AH2	D	210	231	Right-handed alpha
Helix 66	AH3	D	233	236	Right-handed 310
Helix 67	AH4	D	263	285	Right-handed alpha
Helix 68	AH5	D	288	308	Right-handed alpha
Helix 69	AH6	D	326	333	Right-handed alpha
Helix 70	AH7	D	337	342	Right-handed alpha
Helix 71	AH8	D	370	377	Right-handed alpha
Helix 72	AH9	D	377	389	Right-handed alpha
Helix 73	AI1	D	393	403	Right-handed alpha
Helix 74	AI2	D	405	416	Right-handed alpha
Helix 75	AI3	D	430	432	Right-handed 310
Helix 76	AI4	D	450	452	Right-handed 310
Helix 77	AI5	D	453	458	Right-handed alpha
Helix 78	AI6	D	473	483	Right-handed alpha
Helix 79	AI7	D	504	514	Right-handed alpha
Helix 80	AI8	D	529	539	Right-handed alpha
Helix 81	AI9	D	573	583	Right-handed alpha
Helix 82	AJ1	D	597	612	Right-handed alpha
Helix 83	AJ2	D	614	636	Right-handed alpha
Helix 84	AJ3	D	648	671	Right-handed alpha
Helix 85	AJ4	D	674	703	Right-handed alpha
Helix 86	AJ5	D	720	729	Right-handed alpha
Helix 87	AJ6	D	733	741	Right-handed alpha
Helix 88	AJ7	D	768	804	Right-handed alpha
Helix 89	AJ8	D	865	876	Right-handed alpha
Helix 90	AJ9	D	915	938	Right-handed alpha
Helix 91	AK1	D	1133	1136	Right-handed 310
Helix 92	AK2	D	1137	1146	Right-handed alpha
Helix 93	AK3	D	1216	1224	Right-handed alpha
Helix 94	AK4	D	1225	1245	Right-handed alpha
Helix 95	AK5	D	1249	1261	Right-handed alpha
Helix 96	AK6	D	1282	1296	Right-handed alpha
Helix 97	AK7	D	1308	1315	Right-handed alpha
Helix 98	AK8	D	1318	1326	Right-handed alpha
Helix 99	AK9	D	1327	1339	Right-handed alpha
Helix 100	AL1	D	1346	1354	Right-handed alpha
Helix 101	AL2	D	1359	1361	Right-handed 310
Helix 102	AL3	D	1362	1376	Right-handed alpha
Helix 103	AL4	E	6	14	Right-handed alpha
Helix 104	AL5	E	15	33	Right-handed alpha
Helix 105	AL6	E	45	57	Right-handed alpha
Helix 106	AL7	E	60	91	Right-handed alpha
Helix 107	AL8	F	80	91	Right-handed alpha
Helix 108	AL9	F	96	107	Right-handed alpha
Helix 109	AM1	F	114	136	Right-handed alpha
Helix 110	AM2	F	137	153	Right-handed alpha
Helix 111	AM3	F	213	233	Right-handed alpha
Helix 112	AM4	F	242	258	Right-handed alpha
Helix 113	AM5	F	262	296	Right-handed alpha
Helix 114	AM6	F	299	310	Right-handed alpha
Helix 115	AM7	F	313	322	Right-handed alpha
Helix 116	AM8	F	324	328	Right-handed 310
Helix 117	AM9	F	330	352	Right-handed alpha
Helix 118	AN1	F	354	394	Right-handed alpha
Helix 119	AN2	F	400	417	Right-handed alpha
Helix 120	AN3	F	426	446	Right-handed alpha
Helix 121	AN4	F	453	475	Right-handed alpha
Helix 122	AN5	F	479	488	Right-handed alpha
Helix 123	AN6	F	490	501	Right-handed alpha
Helix 124	AN7	F	530	551	Right-handed alpha
Helix 125	AN8	F	552	564	Right-handed alpha
Helix 126	AN9	F	572	581	Right-handed alpha
Helix 127	AO1	F	583	599	Right-handed alpha
Helix 128	AO2	F	600	605	Right-handed alpha
Helix 129	AO3	F	607	611	Right-handed 310
Helix 130	AO4	G	7	18	Right-handed alpha
Helix 131	AO5	G	24	30	Right-handed alpha
Helix 132	AO6	G	31	33	Right-handed 310
Helix 133	AO7	G	35	46	Right-handed alpha
Helix 134	AO8	G	50	67	Right-handed alpha
Helix 135	AO9	G	73	78	Right-handed alpha
Helix 136	AP1	G	85	97	Right-handed alpha
Helix 137	AP2	G	100	107	Right-handed alpha

There are 45 sheets in PDB entry 7BEF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	31	first strand
Strand 2	A	199	207	anti-parallel
Strand 3	A	180	189	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	101	first strand
Strand 2	A	142	147	anti-parallel
Strand 3	A	55	61	anti-parallel
Strand 4	A	170	172	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	121	123	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	111	first strand
Strand 2	A	129	133	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	175	177	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	20	first strand
Strand 2	B	23	31	anti-parallel
Strand 3	B	199	207	anti-parallel
Strand 4	B	180	182	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	20	first strand
Strand 2	B	23	31	anti-parallel
Strand 3	B	199	207	anti-parallel
Strand 4	B	185	186	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	99	first strand
Strand 2	B	140	150	anti-parallel
Strand 3	B	102	104	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	99	first strand
Strand 2	B	140	150	anti-parallel
Strand 3	B	52	61	anti-parallel
Strand 4	B	170	172	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	121	123	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	110	first strand
Strand 2	B	131	133	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	153	first strand
Strand 2	B	175	176	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1182	1183	parallel
Strand 3	C	700	701	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	75	first strand
Strand 2	C	93	104	anti-parallel
Strand 3	C	116	128	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	138	first strand
Strand 2	C	141	144	anti-parallel
Strand 3	C	513	514	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	151	first strand
Strand 2	C	451	454	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	159	first strand
Strand 2	C	172	177	anti-parallel
Strand 3	C	184	189	anti-parallel
Strand 4	C	193	198	anti-parallel
Strand 5	C	203	205	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	285	286	first strand
Strand 2	C	238	239	anti-parallel
Strand 3	C	228	231	anti-parallel
Strand 4	C	332	335	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	302	first strand
Strand 2	C	309	311	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	529	531	first strand
Strand 2	C	572	575	anti-parallel
Strand 3	C	558	559	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	590	anti-parallel
Strand 3	C	605	606	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	598	599	first strand
Strand 2	C	592	595	anti-parallel
Strand 3	C	652	653	anti-parallel
Strand 4	C	616	617	parallel
Strand 5	C	634	638	anti-parallel
Strand 6	C	641	645	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	722	727	first strand
Strand 2	C	731	736	anti-parallel
Strand 3	C	748	752	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1066	1067	first strand
Strand 2	C	1226	1234	anti-parallel
Strand 3	C	798	804	anti-parallel
Strand 4	C	1096	1098	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	816	819	first strand
Strand 2	C	1076	1080	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	832	834	first strand
Strand 2	C	1054	1056	anti-parallel
Strand 3	C	926	928	anti-parallel
Strand 4	C	876	877	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	837	840	first strand
Strand 2	C	1048	1051	anti-parallel
Strand 3	C	932	935	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	882	884	first strand
Strand 2	C	918	919	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	887	889	first strand
Strand 2	C	913	915	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1244	1246	first strand
Strand 2	D	350	354	anti-parallel
Strand 3	D	465	469	anti-parallel
Strand 4	D	421	424	anti-parallel
Strand 5	D	434	437	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1268	1270	first strand
Strand 2	D	345	347	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1335	1336	first strand
Strand 2	D	23	24	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	21	first strand
Strand 2	D	1341	1342	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	103	112	first strand
Strand 2	D	238	244	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	160	first strand
Strand 2	D	144	149	anti-parallel
Strand 3	D	176	179	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	253	254	first strand
Strand 2	D	260	261	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	366	369	first strand
Strand 2	D	439	442	parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	526	527	first strand
Strand 2	D	548	557	parallel
Strand 3	D	563	572	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	820	822	first strand
Strand 2	D	880	882	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	957	959	first strand
Strand 2	D	981	985	anti-parallel
Strand 3	D	991	996	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	966	967	first strand
Strand 2	D	973	974	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1034	1038	first strand
Strand 2	D	1077	1081	anti-parallel
Strand 3	D	1098	1100	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1046	1049	first strand
Strand 2	D	1058	1061	anti-parallel
Strand 3	D	1106	1107	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1162	1165	first strand
Strand 2	D	1173	1178	anti-parallel
Strand 3	D	1186	1190	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1278	1281	first strand
Strand 2	D	1263	1266	anti-parallel
Strand 3	D	1302	1304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BEF

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BEF