Analysis of interatomic Contacts of Structural Units in PDB entry:
7BES


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BES entry

There are 3 chains in PDB entry 7BES (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 28THR 261
B
 SER 28THR 261
C
 SER 28ALA 186
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7BES. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 44Right-handed alpha
Helix 2
AA2
A
50 67Right-handed alpha
Helix 3
AA3
A
82 90Right-handed alpha
Helix 4
AA4
A
92 117Right-handed alpha
Helix 5
AA5
A
138 148Right-handed alpha
Helix 6
AA6
A
164 177Right-handed alpha
Helix 7
AA7
A
209 216Right-handed alpha
Helix 8
AA8
A
221 232Right-handed alpha
Helix 9
AA9
A
244 252Right-handed alpha
Helix 10
AB1
B
39 44Right-handed alpha
Helix 11
AB2
B
50 67Right-handed alpha
Helix 12
AB3
B
82 90Right-handed alpha
Helix 13
AB4
B
92 117Right-handed alpha
Helix 14
AB5
B
138 148Right-handed alpha
Helix 15
AB6
B
164 176Right-handed alpha
Helix 16
AB7
B
209 216Right-handed alpha
Helix 17
AB8
B
221 231Right-handed alpha
Helix 18
AB9
B
244 252Right-handed alpha
Helix 19
AC1
C
39 44Right-handed alpha
Helix 20
AC2
C
50 67Right-handed alpha
Helix 21
AC3
C
82 90Right-handed alpha
Helix 22
AC4
C
92 117Right-handed alpha
Helix 23
AC5
C
138 148Right-handed alpha
Helix 24
AC6
C
164 177Right-handed alpha
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There are 3 sheets in PDB entry 7BES. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
122 126parallel
Strand 3
A
151 155parallel
Strand 4
A
70 75parallel
Strand 5
A
32 37parallel
Strand 6
A
180 185parallel
Strand 7
A
235 239parallel
Strand 8
A
257 260anti-parallel
Strand 9
A
206 208parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
122 126parallel
Strand 3
B
151 155parallel
Strand 4
B
70 75parallel
Strand 5
B
32 37parallel
Strand 6
B
180 185parallel
Strand 7
B
235 239parallel
Strand 8
B
257 260anti-parallel
Strand 9
B
206 208parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
135 136first strand
Strand 2
C
122 126parallel
Strand 3
C
151 155parallel
Strand 4
C
70 75parallel
Strand 5
C
32 37parallel
Strand 6
C
180 183parallel
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