Analysis of interatomic Contacts of Structural Units in PDB entry:
7BF0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BF0 entry

There are 2 chains in PDB entry 7BF0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -3PRO 616
B
 ILE 408PRO 616
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7BF0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
409 420Right-handed alpha
Helix 2
AA2
A
430 433Right-handed 310
Helix 3
AA3
A
467 475Right-handed alpha
Helix 4
AA4
A
478 492Right-handed alpha
Helix 5
AA5
A
504 508Right-handed 310
Helix 6
AA6
A
509 517Right-handed alpha
Helix 7
AA7
A
520 524Right-handed 310
Helix 8
AA8
A
531 542Right-handed alpha
Helix 9
AA9
A
581 587Right-handed alpha
Helix 10
AB1
A
590 605Right-handed alpha
Helix 11
AB2
B
409 420Right-handed alpha
Helix 12
AB3
B
430 433Right-handed 310
Helix 13
AB4
B
467 475Right-handed alpha
Helix 14
AB5
B
478 492Right-handed alpha
Helix 15
AB6
B
504 508Right-handed 310
Helix 16
AB7
B
509 518Right-handed alpha
Helix 17
AB8
B
520 524Right-handed 310
Helix 18
AB9
B
531 542Right-handed alpha
Helix 19
AC1
B
581 587Right-handed alpha
Helix 20
AC2
B
590 605Right-handed alpha
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There are 6 sheets in PDB entry 7BF0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 428first strand
Strand 2
A
610 615parallel
Strand 3
A
558 561parallel
Strand 4
A
577 580parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 438first strand
Strand 2
A
566 567anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 445first strand
Strand 2
A
495 501parallel
Strand 3
A
545 549parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
423 428first strand
Strand 2
B
610 615parallel
Strand 3
B
558 561parallel
Strand 4
B
577 580parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
437 438first strand
Strand 2
B
566 567anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
444 445first strand
Strand 2
B
495 501parallel
Strand 3
B
545 549parallel
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