Analysis of interatomic Contacts of Structural Units in PDB entry:
7BGY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BGY entry

There are 4 chains in PDB entry 7BGY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 557
B
 PHE 9VAL 682
C
 MET 1GLU 190
D
 MET 1PHE 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 7BGY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 32Right-handed alpha
Helix 2
AA2
A
40 50Right-handed alpha
Helix 3
AA3
A
58 83Right-handed alpha
Helix 4
AA4
A
98 111Right-handed alpha
Helix 5
AA5
A
125 132Right-handed alpha
Helix 6
AA6
A
132 157Right-handed alpha
Helix 7
AA7
A
165 177Right-handed alpha
Helix 8
AA8
A
177 193Right-handed alpha
Helix 9
AA9
A
218 229Right-handed alpha
Helix 10
AB1
A
248 274Right-handed alpha
Helix 11
AB2
A
276 305Right-handed alpha
Helix 12
AB3
A
306 314Right-handed alpha
Helix 13
AB4
A
328 342Right-handed alpha
Helix 14
AB5
A
355 368Right-handed alpha
Helix 15
AB6
A
377 399Right-handed alpha
Helix 16
AB7
A
410 437Right-handed alpha
Helix 17
AB8
A
438 443Right-handed alpha
Helix 18
AB9
A
449 465Right-handed alpha
Helix 19
AC1
A
478 509Right-handed alpha
Helix 20
AC2
A
523 549Right-handed alpha
Helix 21
AC3
A
550 557Right-handed alpha
Helix 22
AC4
B
10 25Right-handed alpha
Helix 23
AC5
B
26 31Right-handed alpha
Helix 24
AC6
B
33 56Right-handed alpha
Helix 25
AC7
B
61 86Right-handed alpha
Helix 26
AC8
B
94 103Right-handed alpha
Helix 27
AC9
B
124 126Right-handed 310
Helix 28
AD1
B
155 160Right-handed alpha
Helix 29
AD2
B
198 208Right-handed alpha
Helix 30
AD3
B
215 246Right-handed alpha
Helix 31
AD4
B
251 263Right-handed alpha
Helix 32
AD5
B
264 285Right-handed alpha
Helix 33
AD6
B
292 300Right-handed alpha
Helix 34
AD7
B
329 341Right-handed alpha
Helix 35
AD8
B
346 361Right-handed alpha
Helix 36
AD9
B
397 408Right-handed alpha
Helix 37
AE1
B
414 426Right-handed alpha
Helix 38
AE2
B
453 463Right-handed alpha
Helix 39
AE3
B
474 486Right-handed alpha
Helix 40
AE4
B
495 509Right-handed alpha
Helix 41
AE5
B
519 521Right-handed 310
Helix 42
AE6
B
522 529Right-handed alpha
Helix 43
AE7
B
539 546Right-handed alpha
Helix 44
AE8
B
557 596Right-handed alpha
Helix 45
AE9
B
599 604Right-handed 310
Helix 46
AF1
B
612 637Right-handed alpha
Helix 47
AF2
B
645 680Right-handed alpha
Helix 48
AF3
C
3 20Right-handed alpha
Helix 49
AF4
C
20 34Right-handed alpha
Helix 50
AF5
C
78 82Right-handed 310
Helix 51
AF6
C
91 109Right-handed alpha
Helix 52
AF7
C
117 122Right-handed alpha
Helix 53
AF8
C
133 139Right-handed alpha
Helix 54
AF9
C
140 149Right-handed alpha
Helix 55
AG1
C
151 162Right-handed alpha
Helix 56
AG2
C
178 189Right-handed alpha
Helix 57
AG3
D
2 25Right-handed alpha
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There are 9 sheets in PDB entry 7BGY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 204first strand
Strand 2
A
212 214anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
407 408anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 122first strand
Strand 2
B
105 108anti-parallel
Strand 3
B
131 134anti-parallel
Strand 4
B
187 191anti-parallel
Strand 5
B
144 148anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 167first strand
Strand 2
B
151 154anti-parallel
Strand 3
B
181 182anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 289first strand
Strand 2
B
548 550anti-parallel
Strand 3
B
533 535parallel
Strand 4
B
516 517parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
305 306first strand
Strand 2
B
468 469parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 324first strand
Strand 2
B
439 446anti-parallel
Strand 3
B
428 435anti-parallel
Strand 4
B
393 396anti-parallel
Strand 5
B
383 387anti-parallel
Strand 6
B
373 375anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 44first strand
Strand 2
C
49 52anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 132first strand
Strand 2
C
175 177anti-parallel
Strand 3
C
163 164anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il