Analysis of interatomic Contacts of Structural Units in PDB entry:
7BI2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BI2 entry

There is 1 chain in PDB entry 7BI2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4LYS 1157
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 46 helices in PDB entry 7BI2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 19Right-handed alpha
Helix 2
AA2
A
20 22Right-handed 310
Helix 3
AA3
A
73 82Right-handed alpha
Helix 4
AA4
A
113 116Right-handed 310
Helix 5
AA5
A
117 127Right-handed alpha
Helix 6
AA6
A
147 153Right-handed alpha
Helix 7
AA7
A
169 184Right-handed alpha
Helix 8
AA8
A
188 207Right-handed alpha
Helix 9
AA9
A
212 228Right-handed alpha
Helix 10
AB1
A
257 279Right-handed alpha
Helix 11
AB2
A
298 300Right-handed 310
Helix 12
AB3
A
315 320Right-handed alpha
Helix 13
AB4
A
488 499Right-handed alpha
Helix 14
AB5
A
506 516Right-handed alpha
Helix 15
AB6
A
517 521Right-handed 310
Helix 16
AB7
A
523 525Right-handed 310
Helix 17
AB8
A
526 532Right-handed alpha
Helix 18
AB9
A
538 550Right-handed alpha
Helix 19
AC1
A
558 569Right-handed 310
Helix 20
AC2
A
570 582Right-handed alpha
Helix 21
AC3
A
585 591Right-handed alpha
Helix 22
AC4
A
592 600Right-handed alpha
Helix 23
AC5
A
601 603Right-handed 310
Helix 24
AC6
A
608 621Right-handed alpha
Helix 25
AC7
A
621 635Right-handed alpha
Helix 26
AC8
A
636 638Right-handed 310
Helix 27
AC9
A
641 684Right-handed alpha
Helix 28
AD1
A
688 696Right-handed alpha
Helix 29
AD2
A
697 704Right-handed alpha
Helix 30
AD3
A
761 780Right-handed alpha
Helix 31
AD4
A
811 817Right-handed alpha
Helix 32
AD5
A
830 837Right-handed alpha
Helix 33
AD6
A
839 865Right-handed alpha
Helix 34
AD7
A
892 899Right-handed alpha
Helix 35
AD8
A
910 917Right-handed alpha
Helix 36
AD9
A
924 943Right-handed alpha
Helix 37
AE1
A
944 955Right-handed alpha
Helix 38
AE2
A
956 959Right-handed 310
Helix 39
AE3
A
965 977Right-handed alpha
Helix 40
AE4
A
981 997Right-handed alpha
Helix 41
AE5
A
1002 1017Right-handed alpha
Helix 42
AE6
A
1035 1040Right-handed alpha
Helix 43
AE7
A
1081 1092Right-handed alpha
Helix 44
AE8
A
1113 1133Right-handed alpha
Helix 45
AE9
A
1136 1141Right-handed alpha
Helix 46
AF1
A
1142 1149Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 7BI2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
106 107parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 69first strand
Strand 2
A
50 56anti-parallel
Strand 3
A
130 136parallel
Strand 4
A
97 101anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
464 466parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 368first strand
Strand 2
A
303 312anti-parallel
Strand 3
A
453 458anti-parallel
Strand 4
A
423 428anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 343first strand
Strand 2
A
327 332anti-parallel
Strand 3
A
377 382anti-parallel
Strand 4
A
407 412anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 351first strand
Strand 2
A
355 356anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 722first strand
Strand 2
A
737 743anti-parallel
Strand 3
A
728 729anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 722first strand
Strand 2
A
737 743anti-parallel
Strand 3
A
751 757anti-parallel
Strand 4
A
799 803anti-parallel
Strand 5
A
792 794anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
808 810first strand
Strand 2
A
874 877anti-parallel
Strand 3
A
882 884anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1042 1053first strand
Strand 2
A
1059 1068anti-parallel
Strand 3
A
1075 1080anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il