Analysis of interatomic Contacts of Structural Units in PDB entry:
7BI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BI7 entry

There are 2 chains in PDB entry 7BI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7ALA 285
B
 THR 7ASP 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7BI7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 12Right-handed alpha
Helix 2
AA2
A
64 79Right-handed alpha
Helix 3
AA3
A
95 109Right-handed alpha
Helix 4
AA4
A
122 133Right-handed alpha
Helix 5
AA5
A
146 151Right-handed alpha
Helix 6
AA6
A
166 187Right-handed alpha
Helix 7
AA7
A
205 217Right-handed alpha
Helix 8
AA8
A
229 233Right-handed 310
Helix 9
AA9
A
239 251Right-handed alpha
Helix 10
AB1
B
20 25Right-handed alpha
Helix 11
AB2
B
64 79Right-handed alpha
Helix 12
AB3
B
95 109Right-handed alpha
Helix 13
AB4
B
122 133Right-handed alpha
Helix 14
AB5
B
146 151Right-handed alpha
Helix 15
AB6
B
166 187Right-handed alpha
Helix 16
AB7
B
202 204Right-handed 310
Helix 17
AB8
B
205 217Right-handed alpha
Helix 18
AB9
B
229 233Right-handed 310
Helix 19
AC1
B
239 251Right-handed alpha
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There are 6 sheets in PDB entry 7BI7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 31first strand
Strand 2
A
81 86parallel
Strand 3
A
113 118parallel
Strand 4
A
137 141parallel
Strand 5
A
190 197parallel
Strand 6
A
220 225parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
154 159anti-parallel
Strand 3
A
162 165anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
58 59parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
218 225first strand
Strand 2
B
190 197parallel
Strand 3
B
137 141parallel
Strand 4
B
113 118parallel
Strand 5
B
83 86parallel
Strand 6
B
29 31parallel
Strand 7
B
268 270anti-parallel
Strand 8
B
273 275anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 42first strand
Strand 2
B
154 159anti-parallel
Strand 3
B
162 165anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
58 59parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il