Analysis of interatomic Contacts of Structural Units in PDB entry:
7BKE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BKE entry

There are 9 chains in PDB entry 7BKE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 142	LEU 588
C	ALA 2	GLY 190
B	MET 1	LEU 296
a	PRO 7	GLY 668
F	ASP 4	LYS 140
E	ALA 2	THR 412
c	ALA 2	GLY 190
b	MET 1	LEU 296
D	SER 5	PRO 562

There are142 helices in PDB entry 7BKE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	156	170	Right-handed alpha
Helix 2	AA2	A	199	213	Right-handed alpha
Helix 3	AA3	A	247	255	Right-handed alpha
Helix 4	AA4	A	265	271	Right-handed alpha
Helix 5	AA5	A	312	319	Right-handed alpha
Helix 6	AA6	A	320	322	Right-handed 310
Helix 7	AA7	A	350	354	Right-handed 310
Helix 8	AA8	A	368	376	Right-handed alpha
Helix 9	AA9	A	419	435	Right-handed alpha
Helix 10	AB1	A	453	465	Right-handed alpha
Helix 11	AB2	A	516	525	Right-handed alpha
Helix 12	AB3	A	555	559	Right-handed 310
Helix 13	AB4	A	562	584	Right-handed alpha
Helix 14	AB5	C	8	15	Right-handed alpha
Helix 15	AB6	C	23	25	Right-handed 310
Helix 16	AB7	C	26	38	Right-handed alpha
Helix 17	AB8	C	40	44	Right-handed 310
Helix 18	AB9	C	48	54	Right-handed alpha
Helix 19	AC1	C	56	60	Right-handed 310
Helix 20	AC2	C	63	74	Right-handed alpha
Helix 21	AC3	C	82	86	Right-handed 310
Helix 22	AC4	C	92	98	Right-handed alpha
Helix 23	AC5	C	103	118	Right-handed alpha
Helix 24	AC6	C	122	136	Right-handed alpha
Helix 25	AC7	C	142	153	Right-handed alpha
Helix 26	AC8	C	166	179	Right-handed alpha
Helix 27	AC9	C	179	189	Right-handed alpha
Helix 28	AD1	B	10	15	Right-handed alpha
Helix 29	AD2	B	16	30	Right-handed alpha
Helix 30	AD3	B	53	72	Right-handed alpha
Helix 31	AD4	B	79	94	Right-handed alpha
Helix 32	AD5	B	96	108	Right-handed alpha
Helix 33	AD6	B	109	111	Right-handed 310
Helix 34	AD7	B	123	129	Right-handed alpha
Helix 35	AD8	B	134	142	Right-handed alpha
Helix 36	AD9	B	175	184	Right-handed alpha
Helix 37	AE1	B	200	202	Right-handed 310
Helix 38	AE2	B	203	208	Right-handed alpha
Helix 39	AE3	B	208	227	Right-handed alpha
Helix 40	AE4	B	235	253	Right-handed alpha
Helix 41	AE5	B	264	273	Right-handed alpha
Helix 42	AE6	B	275	280	Right-handed alpha
Helix 43	AE7	B	281	284	Right-handed 310
Helix 44	AE8	B	288	296	Right-handed alpha
Helix 45	AE9	a	25	36	Right-handed alpha
Helix 46	AF1	a	50	65	Right-handed alpha
Helix 47	AF2	a	75	89	Right-handed alpha
Helix 48	AF3	a	115	134	Right-handed alpha
Helix 49	AF4	a	156	170	Right-handed alpha
Helix 50	AF5	a	199	213	Right-handed alpha
Helix 51	AF6	a	247	255	Right-handed alpha
Helix 52	AF7	a	265	271	Right-handed alpha
Helix 53	AF8	a	312	319	Right-handed alpha
Helix 54	AF9	a	320	322	Right-handed 310
Helix 55	AG1	a	350	354	Right-handed 310
Helix 56	AG2	a	368	376	Right-handed alpha
Helix 57	AG3	a	419	435	Right-handed alpha
Helix 58	AG4	a	453	465	Right-handed alpha
Helix 59	AG5	a	516	525	Right-handed alpha
Helix 60	AG6	a	555	559	Right-handed 310
Helix 61	AG7	a	562	584	Right-handed alpha
Helix 62	AG8	a	605	610	Right-handed 310
Helix 63	AG9	a	637	643	Right-handed alpha
Helix 64	AH1	a	654	667	Right-handed alpha
Helix 65	AH2	F	17	28	Right-handed alpha
Helix 66	AH3	F	43	47	Right-handed 310
Helix 67	AH4	F	48	59	Right-handed alpha
Helix 68	AH5	F	77	96	Right-handed alpha
Helix 69	AH6	F	99	101	Right-handed 310
Helix 70	AH7	F	112	131	Right-handed alpha
Helix 71	AH8	F	134	140	Right-handed alpha
Helix 72	AH9	E	14	21	Right-handed alpha
Helix 73	AI1	E	25	37	Right-handed alpha
Helix 74	AI2	E	62	66	Right-handed 310
Helix 75	AI3	E	80	88	Right-handed alpha
Helix 76	AI4	E	89	92	Right-handed 310
Helix 77	AI5	E	101	114	Right-handed alpha
Helix 78	AI6	E	134	145	Right-handed alpha
Helix 79	AI7	E	149	153	Right-handed 310
Helix 80	AI8	E	175	183	Right-handed alpha
Helix 81	AI9	E	187	193	Right-handed alpha
Helix 82	AJ1	E	225	239	Right-handed alpha
Helix 83	AJ2	E	247	276	Right-handed alpha
Helix 84	AJ3	E	279	291	Right-handed alpha
Helix 85	AJ4	E	297	303	Right-handed alpha
Helix 86	AJ5	E	311	315	Right-handed 310
Helix 87	AJ6	E	328	339	Right-handed alpha
Helix 88	AJ7	E	340	342	Right-handed 310
Helix 89	AJ8	E	346	351	Right-handed alpha
Helix 90	AJ9	E	357	374	Right-handed alpha
Helix 91	AK1	E	390	401	Right-handed alpha
Helix 92	AK2	c	8	15	Right-handed alpha
Helix 93	AK3	c	23	25	Right-handed 310
Helix 94	AK4	c	26	38	Right-handed alpha
Helix 95	AK5	c	40	44	Right-handed 310
Helix 96	AK6	c	48	54	Right-handed alpha
Helix 97	AK7	c	56	60	Right-handed 310
Helix 98	AK8	c	63	74	Right-handed alpha
Helix 99	AK9	c	82	86	Right-handed 310
Helix 100	AL1	c	92	98	Right-handed alpha
Helix 101	AL2	c	103	118	Right-handed alpha
Helix 102	AL3	c	122	136	Right-handed alpha
Helix 103	AL4	c	142	153	Right-handed alpha
Helix 104	AL5	c	166	179	Right-handed alpha
Helix 105	AL6	c	179	189	Right-handed alpha
Helix 106	AL7	b	10	15	Right-handed alpha
Helix 107	AL8	b	16	30	Right-handed alpha
Helix 108	AL9	b	53	72	Right-handed alpha
Helix 109	AM1	b	79	94	Right-handed alpha
Helix 110	AM2	b	96	108	Right-handed alpha
Helix 111	AM3	b	109	111	Right-handed 310
Helix 112	AM4	b	123	129	Right-handed alpha
Helix 113	AM5	b	134	142	Right-handed alpha
Helix 114	AM6	b	175	184	Right-handed alpha
Helix 115	AM7	b	200	202	Right-handed 310
Helix 116	AM8	b	203	208	Right-handed alpha
Helix 117	AM9	b	208	227	Right-handed alpha
Helix 118	AN1	b	235	253	Right-handed alpha
Helix 119	AN2	b	264	273	Right-handed alpha
Helix 120	AN3	b	275	280	Right-handed alpha
Helix 121	AN4	b	281	284	Right-handed 310
Helix 122	AN5	b	288	296	Right-handed alpha
Helix 123	AN6	D	50	55	Right-handed alpha
Helix 124	AN7	D	81	101	Right-handed alpha
Helix 125	AN8	D	114	128	Right-handed alpha
Helix 126	AN9	D	144	153	Right-handed alpha
Helix 127	AO1	D	162	168	Right-handed 310
Helix 128	AO2	D	182	196	Right-handed alpha
Helix 129	AO3	D	223	239	Right-handed alpha
Helix 130	AO4	D	242	249	Right-handed alpha
Helix 131	AO5	D	252	261	Right-handed alpha
Helix 132	AO6	D	273	287	Right-handed alpha
Helix 133	AO7	D	306	318	Right-handed alpha
Helix 134	AO8	D	336	344	Right-handed alpha
Helix 135	AO9	D	358	370	Right-handed alpha
Helix 136	AP1	D	381	388	Right-handed alpha
Helix 137	AP2	D	402	407	Right-handed alpha
Helix 138	AP3	D	409	419	Right-handed alpha
Helix 139	AP4	D	432	437	Right-handed 310
Helix 140	AP5	D	475	488	Right-handed alpha
Helix 141	AP6	D	496	508	Right-handed alpha
Helix 142	AP7	D	515	520	Right-handed alpha

There are 33 sheets in PDB entry 7BKE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	145	first strand
Strand 2	A	585	587	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	220	first strand
Strand 2	A	172	177	parallel
Strand 3	A	149	153	parallel
Strand 4	A	339	342	parallel
Strand 5	A	551	553	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	191	192	first strand
Strand 2	A	197	198	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	229	first strand
Strand 2	A	234	240	anti-parallel
Strand 3	A	331	337	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	274	276	first strand
Strand 2	A	285	287	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	290	first strand
Strand 2	A	302	303	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	348	first strand
Strand 2	A	511	513	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	367	first strand
Strand 2	A	504	509	parallel
Strand 3	A	396	403	parallel
Strand 4	A	439	444	parallel
Strand 5	A	467	470	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	475	478	first strand
Strand 2	A	485	491	anti-parallel
Strand 3	A	496	502	anti-parallel
Strand 4	C	20	21	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	36	first strand
Strand 2	B	2	6	parallel
Strand 3	B	74	77	parallel
Strand 4	B	120	122	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	189	first strand
Strand 2	B	150	154	parallel
Strand 3	B	230	233	parallel
Strand 4	B	261	263	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	39	45	first strand
Strand 2	a	9	14	parallel
Strand 3	a	68	73	parallel
Strand 4	a	97	101	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	142	145	first strand
Strand 2	a	585	588	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	216	220	first strand
Strand 2	a	172	177	parallel
Strand 3	a	149	153	parallel
Strand 4	a	339	342	parallel
Strand 5	a	551	553	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	191	192	first strand
Strand 2	a	197	198	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	222	229	first strand
Strand 2	a	234	240	anti-parallel
Strand 3	a	331	337	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	274	276	first strand
Strand 2	a	285	287	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	289	290	first strand
Strand 2	a	302	303	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	346	348	first strand
Strand 2	a	511	513	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	365	367	first strand
Strand 2	a	504	509	parallel
Strand 3	a	396	403	parallel
Strand 4	a	439	444	parallel
Strand 5	a	467	470	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	475	478	first strand
Strand 2	a	485	491	anti-parallel
Strand 3	a	496	502	anti-parallel
Strand 4	c	20	21	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	593	595	first strand
Strand 2	a	648	650	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	615	620	first strand
Strand 2	a	623	628	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	36	38	first strand
Strand 2	F	9	13	parallel
Strand 3	F	62	67	parallel
Strand 4	F	103	107	parallel
Strand 5	E	405	406	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	55	60	first strand
Strand 2	E	42	48	anti-parallel
Strand 3	E	96	100	parallel
Strand 4	E	122	127	parallel
Strand 5	E	203	206	parallel
Strand 6	E	219	223	anti-parallel
Strand 7	E	7	12	anti-parallel
Strand 8	E	241	245	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	155	159	first strand
Strand 2	E	162	167	anti-parallel
Strand 3	E	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	32	36	first strand
Strand 2	b	2	6	parallel
Strand 3	b	74	77	parallel
Strand 4	b	120	122	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	187	189	first strand
Strand 2	b	150	154	parallel
Strand 3	b	230	233	parallel
Strand 4	b	261	263	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	14	first strand
Strand 2	D	23	29	anti-parallel
Strand 3	D	32	38	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	79	first strand
Strand 2	D	70	72	anti-parallel
Strand 3	D	439	442	anti-parallel
Strand 4	D	423	427	parallel
Strand 5	D	396	398	parallel
Strand 6	D	106	108	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	215	216	first strand
Strand 2	D	198	201	parallel
Strand 3	D	170	174	parallel
Strand 4	D	291	294	parallel
Strand 5	D	327	330	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	250	251	first strand
Strand 2	D	552	553	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	452	454	first strand
Strand 2	D	459	462	anti-parallel
Strand 3	D	525	526	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BKE

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BKE