Analysis of interatomic Contacts of Structural Units in PDB entry:
7BLF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BLF entry

There are 2 chains in PDB entry 7BLF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 24ARG 433
B
 LEU 23GLY 431
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7BLF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 57Right-handed 310
Helix 2
AA2
A
86 98Right-handed alpha
Helix 3
AA3
A
112 116Right-handed 310
Helix 4
AA4
A
126 143Right-handed alpha
Helix 5
AA5
A
154 158Right-handed 310
Helix 6
AA6
A
172 176Right-handed 310
Helix 7
AA7
A
178 181Right-handed 310
Helix 8
AA8
A
201 223Right-handed alpha
Helix 9
AA9
A
235 242Right-handed alpha
Helix 10
AB1
A
255 260Right-handed alpha
Helix 11
AB2
A
260 274Right-handed alpha
Helix 12
AB3
A
301 313Right-handed alpha
Helix 13
AB4
A
340 352Right-handed alpha
Helix 14
AB5
A
353 355Right-handed 310
Helix 15
AB6
A
365 375Right-handed alpha
Helix 16
AB7
A
401 407Right-handed alpha
Helix 17
AB8
A
409 419Right-handed alpha
Helix 18
AB9
A
425 430Right-handed alpha
Helix 19
AC1
A
431 433Right-handed 310
Helix 20
AC2
B
53 57Right-handed 310
Helix 21
AC3
B
86 98Right-handed alpha
Helix 22
AC4
B
112 116Right-handed 310
Helix 23
AC5
B
126 143Right-handed alpha
Helix 24
AC6
B
154 158Right-handed 310
Helix 25
AC7
B
178 181Right-handed 310
Helix 26
AC8
B
201 223Right-handed alpha
Helix 27
AC9
B
235 242Right-handed alpha
Helix 28
AD1
B
255 260Right-handed alpha
Helix 29
AD2
B
260 274Right-handed alpha
Helix 30
AD3
B
301 313Right-handed alpha
Helix 31
AD4
B
340 352Right-handed alpha
Helix 32
AD5
B
353 355Right-handed 310
Helix 33
AD6
B
365 375Right-handed alpha
Helix 34
AD7
B
401 407Right-handed alpha
Helix 35
AD8
B
409 418Right-handed alpha
Helix 36
AD9
B
425 430Right-handed alpha
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There are 6 sheets in PDB entry 7BLF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
64 66anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
103 110parallel
Strand 3
A
147 152parallel
Strand 4
A
226 231parallel
Strand 5
A
280 285parallel
Strand 6
A
319 323parallel
Strand 7
A
356 360parallel
Strand 8
A
397 400parallel
Strand 9
A
70 72parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 184first strand
Strand 2
A
198 199parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 61first strand
Strand 2
B
64 66anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 123first strand
Strand 2
B
103 110parallel
Strand 3
B
147 152parallel
Strand 4
B
226 231parallel
Strand 5
B
280 285parallel
Strand 6
B
319 323parallel
Strand 7
B
356 360parallel
Strand 8
B
397 400parallel
Strand 9
B
70 72parallel
Strand 10
B
103 110parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 184first strand
Strand 2
B
198 199parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il