Analysis of interatomic Contacts of Structural Units in PDB entry:
7BN7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BN7 entry

There are 4 chains in PDB entry 7BN7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 2	TRP 397
B	PRO 2	LEU 395
C	PRO 2	TRP 397
D	PRO 2	TRP 397

There are 73 helices in PDB entry 7BN7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	19	Right-handed 310
Helix 2	AA2	A	53	62	Right-handed alpha
Helix 3	AA3	A	77	81	Right-handed 310
Helix 4	AA4	A	91	108	Right-handed alpha
Helix 5	AA5	A	119	123	Right-handed 310
Helix 6	AA6	A	124	131	Right-handed alpha
Helix 7	AA7	A	145	155	Right-handed alpha
Helix 8	AA8	A	163	184	Right-handed alpha
Helix 9	AA9	A	197	204	Right-handed alpha
Helix 10	AB1	A	217	222	Right-handed alpha
Helix 11	AB2	A	222	237	Right-handed alpha
Helix 12	AB3	A	255	259	Right-handed 310
Helix 13	AB4	A	261	279	Right-handed alpha
Helix 14	AB5	A	310	316	Right-handed 310
Helix 15	AB6	A	330	338	Right-handed alpha
Helix 16	AB7	A	348	354	Right-handed alpha
Helix 17	AB8	A	356	364	Right-handed alpha
Helix 18	AB9	A	371	375	Right-handed 310
Helix 19	AC1	A	388	394	Right-handed alpha
Helix 20	AC2	B	15	19	Right-handed 310
Helix 21	AC3	B	53	62	Right-handed alpha
Helix 22	AC4	B	91	108	Right-handed alpha
Helix 23	AC5	B	119	123	Right-handed 310
Helix 24	AC6	B	124	131	Right-handed alpha
Helix 25	AC7	B	145	155	Right-handed alpha
Helix 26	AC8	B	163	184	Right-handed alpha
Helix 27	AC9	B	197	204	Right-handed alpha
Helix 28	AD1	B	217	222	Right-handed alpha
Helix 29	AD2	B	222	237	Right-handed alpha
Helix 30	AD3	B	255	259	Right-handed 310
Helix 31	AD4	B	261	279	Right-handed alpha
Helix 32	AD5	B	312	317	Right-handed alpha
Helix 33	AD6	B	330	338	Right-handed alpha
Helix 34	AD7	B	348	354	Right-handed alpha
Helix 35	AD8	B	356	364	Right-handed alpha
Helix 36	AD9	B	371	375	Right-handed 310
Helix 37	AE1	B	388	394	Right-handed alpha
Helix 38	AE2	C	15	19	Right-handed 310
Helix 39	AE3	C	53	62	Right-handed alpha
Helix 40	AE4	C	77	81	Right-handed 310
Helix 41	AE5	C	91	108	Right-handed alpha
Helix 42	AE6	C	119	123	Right-handed 310
Helix 43	AE7	C	124	131	Right-handed alpha
Helix 44	AE8	C	145	155	Right-handed alpha
Helix 45	AE9	C	163	184	Right-handed alpha
Helix 46	AF1	C	197	204	Right-handed alpha
Helix 47	AF2	C	217	237	Right-handed alpha
Helix 48	AF3	C	255	259	Right-handed 310
Helix 49	AF4	C	261	279	Right-handed alpha
Helix 50	AF5	C	311	317	Right-handed alpha
Helix 51	AF6	C	330	338	Right-handed alpha
Helix 52	AF7	C	348	353	Right-handed alpha
Helix 53	AF8	C	356	364	Right-handed alpha
Helix 54	AF9	C	371	375	Right-handed 310
Helix 55	AG1	C	388	396	Right-handed alpha
Helix 56	AG2	D	15	19	Right-handed 310
Helix 57	AG3	D	53	62	Right-handed alpha
Helix 58	AG4	D	77	81	Right-handed 310
Helix 59	AG5	D	91	108	Right-handed alpha
Helix 60	AG6	D	119	123	Right-handed 310
Helix 61	AG7	D	124	131	Right-handed alpha
Helix 62	AG8	D	145	155	Right-handed alpha
Helix 63	AG9	D	163	184	Right-handed alpha
Helix 64	AH1	D	197	204	Right-handed alpha
Helix 65	AH2	D	217	237	Right-handed alpha
Helix 66	AH3	D	255	259	Right-handed 310
Helix 67	AH4	D	261	279	Right-handed alpha
Helix 68	AH5	D	310	316	Right-handed 310
Helix 69	AH6	D	330	338	Right-handed alpha
Helix 70	AH7	D	348	354	Right-handed alpha
Helix 71	AH8	D	356	364	Right-handed alpha
Helix 72	AH9	D	371	375	Right-handed 310
Helix 73	AI1	D	388	396	Right-handed alpha

There are 12 sheets in PDB entry 7BN7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	23	first strand
Strand 2	A	26	28	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	343	346	parallel
Strand 3	A	321	324	parallel
Strand 4	A	285	289	parallel
Strand 5	A	241	245	parallel
Strand 6	A	188	192	parallel
Strand 7	A	111	116	parallel
Strand 8	A	68	74	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	137	first strand
Strand 2	A	160	161	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	23	first strand
Strand 2	B	26	28	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	33	first strand
Strand 2	B	343	346	parallel
Strand 3	B	321	324	parallel
Strand 4	B	285	289	parallel
Strand 5	B	241	245	parallel
Strand 6	B	188	192	parallel
Strand 7	B	111	116	parallel
Strand 8	B	68	74	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	137	first strand
Strand 2	B	160	161	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	23	first strand
Strand 2	C	26	28	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	33	first strand
Strand 2	C	343	346	parallel
Strand 3	C	321	324	parallel
Strand 4	C	285	289	parallel
Strand 5	C	241	245	parallel
Strand 6	C	188	192	parallel
Strand 7	C	111	116	parallel
Strand 8	C	68	74	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	137	first strand
Strand 2	C	159	161	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	23	first strand
Strand 2	D	26	28	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	33	first strand
Strand 2	D	343	346	parallel
Strand 3	D	321	324	parallel
Strand 4	D	285	289	parallel
Strand 5	D	241	245	parallel
Strand 6	D	188	192	parallel
Strand 7	D	111	116	parallel
Strand 8	D	68	74	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	136	137	first strand
Strand 2	D	160	161	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BN7

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BN7