Analysis of interatomic Contacts of Structural Units in PDB entry:
7BN9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BN9 entry

There are 2 chains in PDB entry 7BN9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TRP 28	ASN 668
B	TRP 38	ASN 668

There are 54 helices in PDB entry 7BN9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	40	Right-handed alpha
Helix 2	AA2	A	42	48	Right-handed alpha
Helix 3	AA3	A	51	56	Right-handed alpha
Helix 4	AA4	A	59	75	Right-handed alpha
Helix 5	AA5	A	136	140	Right-handed 310
Helix 6	AA6	A	183	188	Right-handed 310
Helix 7	AA7	A	189	202	Right-handed alpha
Helix 8	AA8	A	204	213	Right-handed alpha
Helix 9	AA9	A	232	241	Right-handed alpha
Helix 10	AB1	A	257	260	Right-handed 310
Helix 11	AB2	A	261	266	Right-handed alpha
Helix 12	AB3	A	272	279	Right-handed alpha
Helix 13	AB4	A	294	299	Right-handed alpha
Helix 14	AB5	A	299	305	Right-handed alpha
Helix 15	AB6	A	336	348	Right-handed alpha
Helix 16	AB7	A	376	381	Right-handed alpha
Helix 17	AB8	A	383	393	Right-handed alpha
Helix 18	AB9	A	408	411	Right-handed 310
Helix 19	AC1	A	412	423	Right-handed alpha
Helix 20	AC2	A	461	468	Right-handed alpha
Helix 21	AC3	A	470	482	Right-handed alpha
Helix 22	AC4	A	482	493	Right-handed alpha
Helix 23	AC5	A	517	527	Right-handed alpha
Helix 24	AC6	A	534	542	Right-handed alpha
Helix 25	AC7	A	543	546	Right-handed 310
Helix 26	AC8	A	573	590	Right-handed alpha
Helix 27	AC9	A	653	663	Right-handed alpha
Helix 28	AD1	B	46	50	Right-handed 310
Helix 29	AD2	B	51	58	Right-handed alpha
Helix 30	AD3	B	59	71	Right-handed alpha
Helix 31	AD4	B	136	140	Right-handed 310
Helix 32	AD5	B	182	187	Right-handed alpha
Helix 33	AD6	B	189	201	Right-handed alpha
Helix 34	AD7	B	204	213	Right-handed alpha
Helix 35	AD8	B	232	241	Right-handed alpha
Helix 36	AD9	B	257	260	Right-handed 310
Helix 37	AE1	B	261	266	Right-handed alpha
Helix 38	AE2	B	272	277	Right-handed alpha
Helix 39	AE3	B	294	299	Right-handed alpha
Helix 40	AE4	B	299	305	Right-handed alpha
Helix 41	AE5	B	336	348	Right-handed alpha
Helix 42	AE6	B	375	380	Right-handed alpha
Helix 43	AE7	B	383	393	Right-handed alpha
Helix 44	AE8	B	408	410	Right-handed 310
Helix 45	AE9	B	411	424	Right-handed alpha
Helix 46	AF1	B	442	446	Right-handed 310
Helix 47	AF2	B	461	469	Right-handed alpha
Helix 48	AF3	B	470	482	Right-handed alpha
Helix 49	AF4	B	482	493	Right-handed alpha
Helix 50	AF5	B	517	526	Right-handed alpha
Helix 51	AF6	B	534	543	Right-handed alpha
Helix 52	AF7	B	544	546	Right-handed 310
Helix 53	AF8	B	573	590	Right-handed alpha
Helix 54	AF9	B	653	663	Right-handed alpha

There are 18 sheets in PDB entry 7BN9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	83	first strand
Strand 2	A	96	107	anti-parallel
Strand 3	A	110	125	anti-parallel
Strand 4	A	128	133	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	155	first strand
Strand 2	A	308	312	anti-parallel
Strand 3	A	319	323	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	227	first strand
Strand 2	A	169	181	anti-parallel
Strand 3	A	245	254	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	227	first strand
Strand 2	A	169	181	anti-parallel
Strand 3	A	162	163	anti-parallel
Strand 4	A	331	332	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	270	first strand
Strand 2	A	289	293	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	370	first strand
Strand 2	A	352	358	anti-parallel
Strand 3	A	640	645	anti-parallel
Strand 4	A	625	633	anti-parallel
Strand 5	A	605	613	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	432	433	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	438	439	first strand
Strand 2	A	450	451	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	551	552	first strand
Strand 2	A	566	568	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	106	first strand
Strand 2	B	110	111	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	155	first strand
Strand 2	B	308	311	anti-parallel
Strand 3	B	321	323	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	227	first strand
Strand 2	B	169	181	anti-parallel
Strand 3	B	245	254	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	227	first strand
Strand 2	B	169	181	anti-parallel
Strand 3	B	162	163	anti-parallel
Strand 4	B	331	332	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	267	270	first strand
Strand 2	B	289	293	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	370	first strand
Strand 2	B	352	357	anti-parallel
Strand 3	B	640	645	anti-parallel
Strand 4	B	625	633	anti-parallel
Strand 5	B	605	613	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	432	433	first strand
Strand 2	B	459	460	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	438	439	first strand
Strand 2	B	450	451	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	551	552	first strand
Strand 2	B	566	568	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BN9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BN9