Analysis of interatomic Contacts of Structural Units in PDB entry:
7BNI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BNI entry

There are 2 chains in PDB entry 7BNI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 398ASN 493
B
 SER 398ASN 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 7BNI

There are 4 sheets in PDB entry 7BNI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
410 420anti-parallel
Strand 3
A
446 455anti-parallel
Strand 4
A
458 464anti-parallel
Strand 5
A
470 477anti-parallel
Strand 6
A
424 428anti-parallel
Strand 7
A
437 441anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 404first strand
Strand 2
A
410 420anti-parallel
Strand 3
A
490 493anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
403 404first strand
Strand 2
B
410 420anti-parallel
Strand 3
B
446 455anti-parallel
Strand 4
B
458 464anti-parallel
Strand 5
B
470 477anti-parallel
Strand 6
B
424 428anti-parallel
Strand 7
B
437 441anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
403 404first strand
Strand 2
B
410 420anti-parallel
Strand 3
B
490 493anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il