Analysis of interatomic Contacts of Structural Units in PDB entry:
7BOV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BOV entry

There is 1 chain in PDB entry 7BOV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 4SER 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7BOV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 31Right-handed alpha
Helix 2
AA2
A
39 41Right-handed 310
Helix 3
AA3
A
42 49Right-handed alpha
Helix 4
AA4
A
80 93Right-handed alpha
Helix 5
AA5
A
94 96Right-handed 310
Helix 6
AA6
A
109 120Right-handed alpha
Helix 7
AA7
A
140 146Right-handed alpha
Helix 8
AA8
A
189 193Right-handed 310
Helix 9
AA9
A
234 246Right-handed alpha
Helix 10
AB1
A
261 265Right-handed 310
Helix 11
AB2
A
279 285Right-handed alpha
Helix 12
AB3
A
295 306Right-handed alpha
Helix 13
AB4
A
315 328Right-handed alpha
Helix 14
AB5
A
335 339Right-handed 310
Helix 15
AB6
A
340 354Right-handed alpha
Helix 16
AB7
A
354 371Right-handed alpha
Helix 17
AB8
A
372 388Right-handed alpha
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There are 2 sheets in PDB entry 7BOV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
5 9parallel
Strand 3
A
102 106parallel
Strand 4
A
123 127parallel
Strand 5
A
178 180parallel
Strand 6
A
197 199parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 275first strand
Strand 2
A
251 255parallel
Strand 3
A
222 226parallel
Strand 4
A
289 292parallel
Strand 5
A
309 311parallel
Strand 6
A
331 333parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il