Analysis of interatomic Contacts of Structural Units in PDB entry:
7BP8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7BP8 entry

There are 6 chains in PDB entry 7BP8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 20	ARG 766
B	LYS 20	ARG 766
C	LYS 20	ARG 766
D	LYS 20	ARG 766
E	LYS 20	ARG 766
F	LYS 20	ARG 766

There are198 helices in PDB entry 7BP8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	49	Right-handed alpha
Helix 2	AA2	A	85	92	Right-handed alpha
Helix 3	AA3	A	130	139	Right-handed alpha
Helix 4	AA4	A	202	206	Right-handed 310
Helix 5	AA5	A	209	220	Right-handed alpha
Helix 6	AA6	A	220	226	Right-handed alpha
Helix 7	AA7	A	227	232	Right-handed 310
Helix 8	AA8	A	250	263	Right-handed alpha
Helix 9	AA9	A	271	276	Right-handed alpha
Helix 10	AB1	A	278	296	Right-handed alpha
Helix 11	AB2	A	305	310	Right-handed alpha
Helix 12	AB3	A	319	334	Right-handed alpha
Helix 13	AB4	A	349	353	Right-handed 310
Helix 14	AB5	A	373	385	Right-handed alpha
Helix 15	AB6	A	395	403	Right-handed alpha
Helix 16	AB7	A	407	425	Right-handed alpha
Helix 17	AB8	A	438	444	Right-handed alpha
Helix 18	AB9	A	448	458	Right-handed alpha
Helix 19	AC1	A	482	499	Right-handed alpha
Helix 20	AC2	A	500	507	Right-handed alpha
Helix 21	AC3	A	523	536	Right-handed alpha
Helix 22	AC4	A	543	553	Right-handed alpha
Helix 23	AC5	A	558	569	Right-handed alpha
Helix 24	AC6	A	580	586	Right-handed alpha
Helix 25	AC7	A	591	595	Right-handed 310
Helix 26	AC8	A	598	610	Right-handed alpha
Helix 27	AC9	A	630	634	Right-handed 310
Helix 28	AD1	A	649	662	Right-handed alpha
Helix 29	AD2	A	671	679	Right-handed alpha
Helix 30	AD3	A	683	711	Right-handed alpha
Helix 31	AD4	A	732	740	Right-handed alpha
Helix 32	AD5	A	741	743	Right-handed 310
Helix 33	AD6	A	748	761	Right-handed alpha
Helix 34	AD7	B	42	49	Right-handed alpha
Helix 35	AD8	B	85	92	Right-handed alpha
Helix 36	AD9	B	130	139	Right-handed alpha
Helix 37	AE1	B	202	206	Right-handed 310
Helix 38	AE2	B	209	220	Right-handed alpha
Helix 39	AE3	B	220	226	Right-handed alpha
Helix 40	AE4	B	227	232	Right-handed 310
Helix 41	AE5	B	250	263	Right-handed alpha
Helix 42	AE6	B	271	276	Right-handed alpha
Helix 43	AE7	B	278	296	Right-handed alpha
Helix 44	AE8	B	305	310	Right-handed alpha
Helix 45	AE9	B	319	334	Right-handed alpha
Helix 46	AF1	B	349	353	Right-handed 310
Helix 47	AF2	B	373	385	Right-handed alpha
Helix 48	AF3	B	395	403	Right-handed alpha
Helix 49	AF4	B	407	425	Right-handed alpha
Helix 50	AF5	B	438	444	Right-handed alpha
Helix 51	AF6	B	448	458	Right-handed alpha
Helix 52	AF7	B	482	499	Right-handed alpha
Helix 53	AF8	B	500	507	Right-handed alpha
Helix 54	AF9	B	523	536	Right-handed alpha
Helix 55	AG1	B	543	553	Right-handed alpha
Helix 56	AG2	B	558	569	Right-handed alpha
Helix 57	AG3	B	580	586	Right-handed alpha
Helix 58	AG4	B	591	595	Right-handed 310
Helix 59	AG5	B	598	610	Right-handed alpha
Helix 60	AG6	B	630	634	Right-handed 310
Helix 61	AG7	B	649	662	Right-handed alpha
Helix 62	AG8	B	671	679	Right-handed alpha
Helix 63	AG9	B	683	711	Right-handed alpha
Helix 64	AH1	B	732	740	Right-handed alpha
Helix 65	AH2	B	741	743	Right-handed 310
Helix 66	AH3	B	748	761	Right-handed alpha
Helix 67	AH4	C	42	49	Right-handed alpha
Helix 68	AH5	C	85	92	Right-handed alpha
Helix 69	AH6	C	130	139	Right-handed alpha
Helix 70	AH7	C	202	206	Right-handed 310
Helix 71	AH8	C	209	220	Right-handed alpha
Helix 72	AH9	C	220	226	Right-handed alpha
Helix 73	AI1	C	227	232	Right-handed 310
Helix 74	AI2	C	250	263	Right-handed alpha
Helix 75	AI3	C	271	276	Right-handed alpha
Helix 76	AI4	C	278	296	Right-handed alpha
Helix 77	AI5	C	305	310	Right-handed alpha
Helix 78	AI6	C	319	334	Right-handed alpha
Helix 79	AI7	C	349	353	Right-handed 310
Helix 80	AI8	C	373	385	Right-handed alpha
Helix 81	AI9	C	395	403	Right-handed alpha
Helix 82	AJ1	C	407	425	Right-handed alpha
Helix 83	AJ2	C	438	444	Right-handed alpha
Helix 84	AJ3	C	448	458	Right-handed alpha
Helix 85	AJ4	C	482	499	Right-handed alpha
Helix 86	AJ5	C	500	507	Right-handed alpha
Helix 87	AJ6	C	523	536	Right-handed alpha
Helix 88	AJ7	C	543	553	Right-handed alpha
Helix 89	AJ8	C	558	569	Right-handed alpha
Helix 90	AJ9	C	580	586	Right-handed alpha
Helix 91	AK1	C	591	595	Right-handed 310
Helix 92	AK2	C	598	610	Right-handed alpha
Helix 93	AK3	C	630	634	Right-handed 310
Helix 94	AK4	C	649	662	Right-handed alpha
Helix 95	AK5	C	671	679	Right-handed alpha
Helix 96	AK6	C	683	711	Right-handed alpha
Helix 97	AK7	C	732	740	Right-handed alpha
Helix 98	AK8	C	741	743	Right-handed 310
Helix 99	AK9	C	748	761	Right-handed alpha
Helix 100	AL1	D	42	49	Right-handed alpha
Helix 101	AL2	D	85	92	Right-handed alpha
Helix 102	AL3	D	130	139	Right-handed alpha
Helix 103	AL4	D	202	206	Right-handed 310
Helix 104	AL5	D	209	220	Right-handed alpha
Helix 105	AL6	D	220	226	Right-handed alpha
Helix 106	AL7	D	227	232	Right-handed 310
Helix 107	AL8	D	250	263	Right-handed alpha
Helix 108	AL9	D	271	276	Right-handed alpha
Helix 109	AM1	D	278	296	Right-handed alpha
Helix 110	AM2	D	305	310	Right-handed alpha
Helix 111	AM3	D	319	334	Right-handed alpha
Helix 112	AM4	D	349	353	Right-handed 310
Helix 113	AM5	D	373	385	Right-handed alpha
Helix 114	AM6	D	395	403	Right-handed alpha
Helix 115	AM7	D	407	425	Right-handed alpha
Helix 116	AM8	D	438	444	Right-handed alpha
Helix 117	AM9	D	448	458	Right-handed alpha
Helix 118	AN1	D	482	499	Right-handed alpha
Helix 119	AN2	D	500	507	Right-handed alpha
Helix 120	AN3	D	523	536	Right-handed alpha
Helix 121	AN4	D	543	553	Right-handed alpha
Helix 122	AN5	D	558	569	Right-handed alpha
Helix 123	AN6	D	580	586	Right-handed alpha
Helix 124	AN7	D	591	595	Right-handed 310
Helix 125	AN8	D	598	610	Right-handed alpha
Helix 126	AN9	D	630	634	Right-handed 310
Helix 127	AO1	D	649	662	Right-handed alpha
Helix 128	AO2	D	671	679	Right-handed alpha
Helix 129	AO3	D	683	711	Right-handed alpha
Helix 130	AO4	D	732	740	Right-handed alpha
Helix 131	AO5	D	741	743	Right-handed 310
Helix 132	AO6	D	748	761	Right-handed alpha
Helix 133	AO7	E	42	49	Right-handed alpha
Helix 134	AO8	E	85	92	Right-handed alpha
Helix 135	AO9	E	130	139	Right-handed alpha
Helix 136	AP1	E	202	206	Right-handed 310
Helix 137	AP2	E	209	220	Right-handed alpha
Helix 138	AP3	E	220	226	Right-handed alpha
Helix 139	AP4	E	227	232	Right-handed 310
Helix 140	AP5	E	250	263	Right-handed alpha
Helix 141	AP6	E	271	276	Right-handed alpha
Helix 142	AP7	E	278	296	Right-handed alpha
Helix 143	AP8	E	305	310	Right-handed alpha
Helix 144	AP9	E	319	334	Right-handed alpha
Helix 145	AQ1	E	349	353	Right-handed 310
Helix 146	AQ2	E	373	385	Right-handed alpha
Helix 147	AQ3	E	395	403	Right-handed alpha
Helix 148	AQ4	E	407	425	Right-handed alpha
Helix 149	AQ5	E	438	444	Right-handed alpha
Helix 150	AQ6	E	448	458	Right-handed alpha
Helix 151	AQ7	E	482	499	Right-handed alpha
Helix 152	AQ8	E	500	507	Right-handed alpha
Helix 153	AQ9	E	523	536	Right-handed alpha
Helix 154	AR1	E	543	553	Right-handed alpha
Helix 155	AR2	E	558	569	Right-handed alpha
Helix 156	AR3	E	580	586	Right-handed alpha
Helix 157	AR4	E	591	595	Right-handed 310
Helix 158	AR5	E	598	610	Right-handed alpha
Helix 159	AR6	E	630	634	Right-handed 310
Helix 160	AR7	E	649	662	Right-handed alpha
Helix 161	AR8	E	671	679	Right-handed alpha
Helix 162	AR9	E	683	711	Right-handed alpha
Helix 163	AS1	E	732	740	Right-handed alpha
Helix 164	AS2	E	741	743	Right-handed 310
Helix 165	AS3	E	748	761	Right-handed alpha
Helix 166	AS4	F	42	49	Right-handed alpha
Helix 167	AS5	F	85	92	Right-handed alpha
Helix 168	AS6	F	130	139	Right-handed alpha
Helix 169	AS7	F	202	206	Right-handed 310
Helix 170	AS8	F	209	220	Right-handed alpha
Helix 171	AS9	F	220	226	Right-handed alpha
Helix 172	AT1	F	227	232	Right-handed 310
Helix 173	AT2	F	250	263	Right-handed alpha
Helix 174	AT3	F	271	276	Right-handed alpha
Helix 175	AT4	F	278	296	Right-handed alpha
Helix 176	AT5	F	305	310	Right-handed alpha
Helix 177	AT6	F	319	334	Right-handed alpha
Helix 178	AT7	F	349	353	Right-handed 310
Helix 179	AT8	F	373	385	Right-handed alpha
Helix 180	AT9	F	395	403	Right-handed alpha
Helix 181	AU1	F	407	425	Right-handed alpha
Helix 182	AU2	F	438	444	Right-handed alpha
Helix 183	AU3	F	448	458	Right-handed alpha
Helix 184	AU4	F	482	499	Right-handed alpha
Helix 185	AU5	F	500	507	Right-handed alpha
Helix 186	AU6	F	523	536	Right-handed alpha
Helix 187	AU7	F	543	553	Right-handed alpha
Helix 188	AU8	F	558	569	Right-handed alpha
Helix 189	AU9	F	580	586	Right-handed alpha
Helix 190	AV1	F	591	595	Right-handed 310
Helix 191	AV2	F	598	610	Right-handed alpha
Helix 192	AV3	F	630	634	Right-handed 310
Helix 193	AV4	F	649	662	Right-handed alpha
Helix 194	AV5	F	671	679	Right-handed alpha
Helix 195	AV6	F	683	711	Right-handed alpha
Helix 196	AV7	F	732	740	Right-handed alpha
Helix 197	AV8	F	741	743	Right-handed 310
Helix 198	AV9	F	748	761	Right-handed alpha

There are 30 sheets in PDB entry 7BP8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	29	first strand
Strand 2	A	81	84	parallel
Strand 3	A	38	41	anti-parallel
Strand 4	A	66	73	parallel
Strand 5	A	57	60	anti-parallel
Strand 6	A	99	104	anti-parallel
Strand 7	A	26	29	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	118	first strand
Strand 2	A	159	167	anti-parallel
Strand 3	A	151	156	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	147	first strand
Strand 2	A	173	174	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	270	first strand
Strand 2	A	299	304	parallel
Strand 3	A	341	347	parallel
Strand 4	A	240	244	parallel
Strand 5	A	365	368	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	540	542	first strand
Strand 2	A	572	576	parallel
Strand 3	A	617	623	parallel
Strand 4	A	513	517	parallel
Strand 5	A	641	644	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	29	first strand
Strand 2	B	81	84	parallel
Strand 3	B	38	41	anti-parallel
Strand 4	B	66	73	parallel
Strand 5	B	57	60	anti-parallel
Strand 6	B	99	104	anti-parallel
Strand 7	B	26	29	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	115	118	first strand
Strand 2	B	159	167	anti-parallel
Strand 3	B	151	156	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	147	first strand
Strand 2	B	173	174	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	270	first strand
Strand 2	B	299	304	parallel
Strand 3	B	341	347	parallel
Strand 4	B	240	244	parallel
Strand 5	B	365	368	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	540	542	first strand
Strand 2	B	572	576	parallel
Strand 3	B	617	623	parallel
Strand 4	B	513	517	parallel
Strand 5	B	641	644	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	29	first strand
Strand 2	C	81	84	parallel
Strand 3	C	38	41	anti-parallel
Strand 4	C	66	73	parallel
Strand 5	C	57	60	anti-parallel
Strand 6	C	99	104	anti-parallel
Strand 7	C	26	29	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	115	118	first strand
Strand 2	C	159	167	anti-parallel
Strand 3	C	151	156	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	147	first strand
Strand 2	C	173	174	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	265	270	first strand
Strand 2	C	299	304	parallel
Strand 3	C	341	347	parallel
Strand 4	C	240	244	parallel
Strand 5	C	365	368	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	540	542	first strand
Strand 2	C	572	576	parallel
Strand 3	C	617	623	parallel
Strand 4	C	513	517	parallel
Strand 5	C	641	644	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	29	first strand
Strand 2	D	81	84	parallel
Strand 3	D	38	41	anti-parallel
Strand 4	D	66	73	parallel
Strand 5	D	57	60	anti-parallel
Strand 6	D	99	104	anti-parallel
Strand 7	D	26	29	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	115	118	first strand
Strand 2	D	159	167	anti-parallel
Strand 3	D	151	156	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	147	first strand
Strand 2	D	173	174	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	265	270	first strand
Strand 2	D	299	304	parallel
Strand 3	D	341	347	parallel
Strand 4	D	240	244	parallel
Strand 5	D	365	368	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	540	542	first strand
Strand 2	D	572	576	parallel
Strand 3	D	617	623	parallel
Strand 4	D	513	517	parallel
Strand 5	D	641	644	parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	26	29	first strand
Strand 2	E	81	84	parallel
Strand 3	E	38	41	anti-parallel
Strand 4	E	66	73	parallel
Strand 5	E	57	60	anti-parallel
Strand 6	E	99	104	anti-parallel
Strand 7	E	26	29	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	115	118	first strand
Strand 2	E	159	167	anti-parallel
Strand 3	E	151	156	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	147	first strand
Strand 2	E	173	174	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	270	first strand
Strand 2	E	299	304	parallel
Strand 3	E	341	347	parallel
Strand 4	E	240	244	parallel
Strand 5	E	365	368	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	540	542	first strand
Strand 2	E	572	576	parallel
Strand 3	E	617	623	parallel
Strand 4	E	513	517	parallel
Strand 5	E	641	644	parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	26	29	first strand
Strand 2	F	81	84	parallel
Strand 3	F	38	41	anti-parallel
Strand 4	F	66	73	parallel
Strand 5	F	57	60	anti-parallel
Strand 6	F	99	104	anti-parallel
Strand 7	F	26	29	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	115	118	first strand
Strand 2	F	159	167	anti-parallel
Strand 3	F	151	156	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	146	147	first strand
Strand 2	F	173	174	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	265	270	first strand
Strand 2	F	299	304	parallel
Strand 3	F	341	347	parallel
Strand 4	F	240	244	parallel
Strand 5	F	365	368	parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	540	542	first strand
Strand 2	F	572	576	parallel
Strand 3	F	617	623	parallel
Strand 4	F	513	517	parallel
Strand 5	F	641	644	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7BP8

Analysis of interatomic Contacts of Structural Units in PDB entry:
7BP8