Analysis of interatomic Contacts of Structural Units in PDB entry:
7BPY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BPY entry

There are 4 chains in PDB entry 7BPY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 198TYR 468
B
 LEU 683GLU 696
C
 LEU 203TYR 468
D
 ARG 686GLU 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7BPY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
200 218Right-handed alpha
Helix 2
AA2
A
221 231Right-handed alpha
Helix 3
AA3
A
243 254Right-handed alpha
Helix 4
AA4
A
254 261Right-handed alpha
Helix 5
AA5
A
267 293Right-handed alpha
Helix 6
AA6
A
301 322Right-handed alpha
Helix 7
AA7
A
341 347Right-handed alpha
Helix 8
AA8
A
350 354Right-handed 310
Helix 9
AA9
A
355 367Right-handed alpha
Helix 10
AB1
A
371 384Right-handed alpha
Helix 11
AB2
A
393 416Right-handed alpha
Helix 12
AB3
A
421 451Right-handed alpha
Helix 13
AB4
A
457 465Right-handed alpha
Helix 14
AB5
B
687 696Right-handed alpha
Helix 15
AB6
C
205 218Right-handed alpha
Helix 16
AB7
C
221 231Right-handed alpha
Helix 17
AB8
C
243 254Right-handed alpha
Helix 18
AB9
C
254 261Right-handed alpha
Helix 19
AC1
C
267 293Right-handed alpha
Helix 20
AC2
C
296 300Right-handed 310
Helix 21
AC3
C
301 322Right-handed alpha
Helix 22
AC4
C
341 347Right-handed alpha
Helix 23
AC5
C
350 354Right-handed 310
Helix 24
AC6
C
355 367Right-handed alpha
Helix 25
AC7
C
371 384Right-handed alpha
Helix 26
AC8
C
393 416Right-handed alpha
Helix 27
AC9
C
421 451Right-handed alpha
Helix 28
AD1
C
457 465Right-handed alpha
Helix 29
AD2
D
687 694Right-handed alpha
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There are 2 sheets in PDB entry 7BPY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 241first strand
Strand 2
A
337 340parallel
Strand 3
A
329 332anti-parallel
Strand 4
A
325 326anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
239 241first strand
Strand 2
C
337 340parallel
Strand 3
C
329 332anti-parallel
Strand 4
C
325 326anti-parallel
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