Analysis of interatomic Contacts of Structural Units in PDB entry:
7BQP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BQP entry

There is 1 chain in PDB entry 7BQP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLU 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7BQP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 25Right-handed alpha
Helix 2
AA2
A
43 91Right-handed alpha
Helix 3
AA3
A
92 97Right-handed alpha
Helix 4
AA4
A
105 113Right-handed alpha
Helix 5
AA5
A
115 128Right-handed alpha
Helix 6
AA6
A
143 148Right-handed alpha
Helix 7
AA7
A
152 165Right-handed alpha
Helix 8
AA8
A
165 170Right-handed alpha
Helix 9
AA9
A
173 182Right-handed alpha
Helix 10
AB1
A
190 194Right-handed 310
Helix 11
AB2
A
203 211Right-handed alpha
Helix 12
AB3
A
223 239Right-handed alpha
Helix 13
AB4
A
243 245Right-handed 310
Helix 14
AB5
A
246 251Right-handed alpha
Helix 15
AB6
A
252 257Right-handed 310
Helix 16
AB7
A
269 279Right-handed alpha
Helix 17
AB8
A
293 302Right-handed alpha
Helix 18
AB9
A
303 307Right-handed 310
Helix 19
AC1
A
336 340Right-handed 310
Helix 20
AC2
A
341 355Right-handed alpha
Helix 21
AC3
A
376 380Right-handed 310
Helix 22
AC4
A
402 420Right-handed alpha
Helix 23
AC5
A
425 437Right-handed alpha
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There are 3 sheets in PDB entry 7BQP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
139 140anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
219 220anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 316first strand
Strand 2
A
282 288parallel
Strand 3
A
259 263parallel
Strand 4
A
330 334parallel
Strand 5
A
362 368parallel
Strand 6
A
453 460anti-parallel
Strand 7
A
440 446anti-parallel
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