Analysis of interatomic Contacts of Structural Units in PDB entry:
7BQW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BQW entry

There are 4 chains in PDB entry 7BQW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5GLU 393
B
 LYS 5ILE 395
C
 LYS 5GLU 393
D
 SER 6LYS 394
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 7BQW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 15Right-handed alpha
Helix 2
AA2
A
18 23Right-handed alpha
Helix 3
AA3
A
62 76Right-handed alpha
Helix 4
AA4
A
85 98Right-handed alpha
Helix 5
AA5
A
113 120Right-handed alpha
Helix 6
AA6
A
122 126Right-handed 310
Helix 7
AA7
A
136 142Right-handed alpha
Helix 8
AA8
A
165 172Right-handed alpha
Helix 9
AA9
A
188 193Right-handed alpha
Helix 10
AB1
A
194 198Right-handed 310
Helix 11
AB2
A
225 235Right-handed alpha
Helix 12
AB3
A
246 258Right-handed alpha
Helix 13
AB4
A
259 280Right-handed alpha
Helix 14
AB5
A
297 305Right-handed alpha
Helix 15
AB6
A
318 330Right-handed alpha
Helix 16
AB7
A
358 364Right-handed alpha
Helix 17
AB8
A
380 393Right-handed alpha
Helix 18
AB9
B
7 15Right-handed alpha
Helix 19
AC1
B
18 23Right-handed alpha
Helix 20
AC2
B
62 76Right-handed alpha
Helix 21
AC3
B
85 98Right-handed alpha
Helix 22
AC4
B
115 120Right-handed alpha
Helix 23
AC5
B
122 126Right-handed 310
Helix 24
AC6
B
136 144Right-handed alpha
Helix 25
AC7
B
165 174Right-handed alpha
Helix 26
AC8
B
188 193Right-handed alpha
Helix 27
AC9
B
194 199Right-handed 310
Helix 28
AD1
B
225 235Right-handed alpha
Helix 29
AD2
B
235 241Right-handed alpha
Helix 30
AD3
B
246 258Right-handed alpha
Helix 31
AD4
B
259 280Right-handed alpha
Helix 32
AD5
B
297 305Right-handed alpha
Helix 33
AD6
B
325 329Right-handed 310
Helix 34
AD7
B
380 394Right-handed alpha
Helix 35
AD8
C
7 15Right-handed alpha
Helix 36
AD9
C
18 23Right-handed alpha
Helix 37
AE1
C
61 75Right-handed alpha
Helix 38
AE2
C
85 98Right-handed alpha
Helix 39
AE3
C
121 126Right-handed 310
Helix 40
AE4
C
136 142Right-handed alpha
Helix 41
AE5
C
165 174Right-handed alpha
Helix 42
AE6
C
194 199Right-handed 310
Helix 43
AE7
C
225 235Right-handed alpha
Helix 44
AE8
C
246 258Right-handed alpha
Helix 45
AE9
C
259 280Right-handed alpha
Helix 46
AF1
C
297 305Right-handed alpha
Helix 47
AF2
C
319 328Right-handed alpha
Helix 48
AF3
C
380 393Right-handed alpha
Helix 49
AF4
D
7 15Right-handed alpha
Helix 50
AF5
D
18 23Right-handed alpha
Helix 51
AF6
D
61 76Right-handed alpha
Helix 52
AF7
D
85 98Right-handed alpha
Helix 53
AF8
D
111 121Right-handed alpha
Helix 54
AF9
D
122 126Right-handed 310
Helix 55
AG1
D
136 142Right-handed alpha
Helix 56
AG2
D
165 175Right-handed alpha
Helix 57
AG3
D
188 193Right-handed alpha
Helix 58
AG4
D
194 199Right-handed 310
Helix 59
AG5
D
225 235Right-handed alpha
Helix 60
AG6
D
246 258Right-handed alpha
Helix 61
AG7
D
259 280Right-handed alpha
Helix 62
AG8
D
297 305Right-handed alpha
Helix 63
AG9
D
318 328Right-handed alpha
Helix 64
AH1
D
380 394Right-handed alpha
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There are 8 sheets in PDB entry 7BQW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 83first strand
Strand 2
A
220 224anti-parallel
Strand 3
A
202 206anti-parallel
Strand 4
A
180 184parallel
Strand 5
A
148 154parallel
Strand 6
A
103 107parallel
Strand 7
A
128 132parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 288first strand
Strand 2
A
311 316anti-parallel
Strand 3
A
372 375anti-parallel
Strand 4
A
345 347anti-parallel
Strand 5
A
334 335parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 83first strand
Strand 2
B
220 224anti-parallel
Strand 3
B
202 206anti-parallel
Strand 4
B
180 184parallel
Strand 5
B
148 154parallel
Strand 6
B
103 107parallel
Strand 7
B
128 132parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 288first strand
Strand 2
B
311 316anti-parallel
Strand 3
B
371 375anti-parallel
Strand 4
B
345 347anti-parallel
Strand 5
B
334 335parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 83first strand
Strand 2
C
220 224anti-parallel
Strand 3
C
202 206anti-parallel
Strand 4
C
180 184parallel
Strand 5
C
148 153parallel
Strand 6
C
103 107parallel
Strand 7
C
128 132parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
286 288first strand
Strand 2
C
311 315anti-parallel
Strand 3
C
371 375anti-parallel
Strand 4
C
345 347anti-parallel
Strand 5
C
334 335parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
79 83first strand
Strand 2
D
220 224anti-parallel
Strand 3
D
202 206anti-parallel
Strand 4
D
180 184parallel
Strand 5
D
148 154parallel
Strand 6
D
103 107parallel
Strand 7
D
128 132parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
284 288first strand
Strand 2
D
311 316anti-parallel
Strand 3
D
373 375anti-parallel
Strand 4
D
345 347anti-parallel
Strand 5
D
334 335parallel
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