Analysis of interatomic Contacts of Structural Units in PDB entry:
7BR9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BR9 entry

There are 2 chains in PDB entry 7BR9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5GLY 461
B
 LYS 4LYS 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 7BR9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 17Right-handed alpha
Helix 2
AA2
A
18 22Right-handed 310
Helix 3
AA3
A
23 45Right-handed alpha
Helix 4
AA4
A
47 58Right-handed alpha
Helix 5
AA5
A
77 91Right-handed alpha
Helix 6
AA6
A
108 119Right-handed alpha
Helix 7
AA7
A
126 146Right-handed alpha
Helix 8
AA8
A
147 153Right-handed 310
Helix 9
AA9
A
159 178Right-handed alpha
Helix 10
AB1
A
180 193Right-handed alpha
Helix 11
AB2
A
198 204Right-handed 310
Helix 12
AB3
A
206 227Right-handed alpha
Helix 13
AB4
A
234 238Right-handed 310
Helix 14
AB5
A
241 246Right-handed 310
Helix 15
AB6
A
277 291Right-handed alpha
Helix 16
AB7
A
292 294Right-handed 310
Helix 17
AB8
A
303 305Right-handed 310
Helix 18
AB9
A
317 321Right-handed 310
Helix 19
AC1
A
327 333Right-handed alpha
Helix 20
AC2
A
334 346Right-handed alpha
Helix 21
AC3
A
349 353Right-handed 310
Helix 22
AC4
A
354 359Right-handed alpha
Helix 23
AC5
A
360 368Right-handed alpha
Helix 24
AC6
A
415 428Right-handed alpha
Helix 25
AC7
A
432 445Right-handed alpha
Helix 26
AC8
A
446 449Right-handed 310
Helix 27
AC9
A
452 459Right-handed alpha
Helix 28
AD1
B
5 17Right-handed alpha
Helix 29
AD2
B
18 22Right-handed 310
Helix 30
AD3
B
23 45Right-handed alpha
Helix 31
AD4
B
47 58Right-handed alpha
Helix 32
AD5
B
77 91Right-handed alpha
Helix 33
AD6
B
108 119Right-handed alpha
Helix 34
AD7
B
126 144Right-handed alpha
Helix 35
AD8
B
145 153Right-handed 310
Helix 36
AD9
B
159 178Right-handed alpha
Helix 37
AE1
B
180 193Right-handed alpha
Helix 38
AE2
B
198 204Right-handed 310
Helix 39
AE3
B
206 227Right-handed alpha
Helix 40
AE4
B
241 246Right-handed 310
Helix 41
AE5
B
277 291Right-handed alpha
Helix 42
AE6
B
292 294Right-handed 310
Helix 43
AE7
B
303 305Right-handed 310
Helix 44
AE8
B
317 321Right-handed 310
Helix 45
AE9
B
327 333Right-handed alpha
Helix 46
AF1
B
334 346Right-handed alpha
Helix 47
AF2
B
349 353Right-handed 310
Helix 48
AF3
B
354 359Right-handed alpha
Helix 49
AF4
B
360 368Right-handed alpha
Helix 50
AF5
B
415 428Right-handed alpha
Helix 51
AF6
B
432 445Right-handed alpha
Helix 52
AF7
B
446 449Right-handed 310
Helix 53
AF8
B
452 459Right-handed alpha
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There are 4 sheets in PDB entry 7BR9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
75 76anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 373first strand
Strand 2
A
307 313parallel
Strand 3
A
387 393anti-parallel
Strand 4
A
398 403anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 67first strand
Strand 2
B
75 76anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
370 373first strand
Strand 2
B
307 313parallel
Strand 3
B
387 393anti-parallel
Strand 4
B
398 403anti-parallel
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