Analysis of interatomic Contacts of Structural Units in PDB entry:
7BSC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BSC entry

There are 3 chains in PDB entry 7BSC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 176ALA 352
H
 GLU 20LYS 240
L
 GLU 20ARG 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 7BSC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
226 230Right-handed 310
Helix 2
AA2
A
237 241Right-handed 310
Helix 3
AA3
A
244 248Right-handed 310
Helix 4
AA4
A
252 256Right-handed 310
Helix 5
AA5
A
267 271Right-handed 310
Helix 6
AA6
A
344 349Right-handed 310
Helix 7
AA7
H
81 84Right-handed 310
Helix 8
AA8
H
106 110Right-handed 310
Helix 9
AA9
H
182 184Right-handed 310
Helix 10
AB1
H
213 216Right-handed 310
Helix 11
AB2
H
227 230Right-handed 310
Helix 12
AB3
L
102 106Right-handed 310
Helix 13
AB4
L
144 151Right-handed alpha
Helix 14
AB5
L
206 211Right-handed alpha
Back to top of page

There are 14 sheets in PDB entry 7BSC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 189first strand
Strand 2
A
192 196anti-parallel
Strand 3
A
200 206anti-parallel
Strand 4
A
210 217anti-parallel
Strand 5
A
273 277anti-parallel
Strand 6
A
321 325anti-parallel
Strand 7
A
328 331anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 287first strand
Strand 2
A
310 313parallel
Strand 3
A
335 337anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
22 26first strand
Strand 2
H
37 44anti-parallel
Strand 3
H
97 102anti-parallel
Strand 4
H
87 92anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
30 31first strand
Strand 2
H
133 137parallel
Strand 3
H
111 119anti-parallel
Strand 4
H
52 59anti-parallel
Strand 5
H
65 71anti-parallel
Strand 6
H
77 79anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
30 31first strand
Strand 2
H
133 137parallel
Strand 3
H
111 119anti-parallel
Strand 4
H
128 129anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
146 150first strand
Strand 2
H
161 171anti-parallel
Strand 3
H
202 211anti-parallel
Strand 4
H
189 191anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
146 150first strand
Strand 2
H
161 171anti-parallel
Strand 3
H
202 211anti-parallel
Strand 4
H
195 196anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
177 180first strand
Strand 2
H
221 226anti-parallel
Strand 3
H
231 236anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
23 26first strand
Strand 2
L
38 44anti-parallel
Strand 3
L
93 98anti-parallel
Strand 4
L
85 90anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
29 32first strand
Strand 2
L
125 129parallel
Strand 3
L
108 113anti-parallel
Strand 4
L
56 61anti-parallel
Strand 5
L
68 72anti-parallel
Strand 6
L
76 77anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
29 32first strand
Strand 2
L
125 129parallel
Strand 3
L
108 113anti-parallel
Strand 4
L
120 121anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
49 50first strand
Strand 2
L
53 54anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
137 141first strand
Strand 2
L
152 162anti-parallel
Strand 3
L
196 205anti-parallel
Strand 4
L
182 186anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
176 177first strand
Strand 2
L
168 173anti-parallel
Strand 3
L
214 220anti-parallel
Strand 4
L
228 233anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il