Analysis of interatomic Contacts of Structural Units in PDB entry:
7BSS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BSS entry

There are 2 chains in PDB entry 7BSS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 19ARG 1091
C
 ARG 27TYR 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 7BSS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 64Right-handed alpha
Helix 2
AA2
A
66 82Right-handed alpha
Helix 3
AA3
A
88 119Right-handed alpha
Helix 4
AA4
A
190 194Right-handed 310
Helix 5
AA5
A
269 273Right-handed 310
Helix 6
AA6
A
287 314Right-handed alpha
Helix 7
AA7
A
330 334Right-handed 310
Helix 8
AA8
A
335 351Right-handed alpha
Helix 9
AA9
A
352 355Right-handed 310
Helix 10
AB1
A
356 357Right-handed 310
Helix 11
AB2
A
358 371Right-handed alpha
Helix 12
AB3
A
396 400Right-handed 310
Helix 13
AB4
A
409 414Right-handed alpha
Helix 14
AB5
A
657 666Right-handed alpha
Helix 15
AB6
A
678 689Right-handed alpha
Helix 16
AB7
A
701 705Right-handed 310
Helix 17
AB8
A
707 718Right-handed alpha
Helix 18
AB9
A
753 761Right-handed alpha
Helix 19
AC1
A
770 779Right-handed alpha
Helix 20
AC2
A
794 803Right-handed alpha
Helix 21
AC3
A
817 820Right-handed 310
Helix 22
AC4
A
821 827Right-handed alpha
Helix 23
AC5
A
840 845Right-handed alpha
Helix 24
AC6
A
854 860Right-handed alpha
Helix 25
AC7
A
861 895Right-handed alpha
Helix 26
AC8
A
904 909Right-handed alpha
Helix 27
AC9
A
909 914Right-handed alpha
Helix 28
AD1
A
917 926Right-handed alpha
Helix 29
AD2
A
932 937Right-handed alpha
Helix 30
AD3
A
941 946Right-handed 310
Helix 31
AD4
A
948 951Right-handed 310
Helix 32
AD5
A
952 975Right-handed alpha
Helix 33
AD6
A
992 1012Right-handed alpha
Helix 34
AD7
A
1025 1040Right-handed alpha
Helix 35
AD8
A
1055 1061Right-handed alpha
Helix 36
AD9
A
1063 1078Right-handed alpha
Helix 37
AE1
A
1078 1090Right-handed alpha
Helix 38
AE2
C
46 51Right-handed alpha
Helix 39
AE3
C
52 57Right-handed alpha
Helix 40
AE4
C
60 72Right-handed alpha
Helix 41
AE5
C
89 93Right-handed 310
Helix 42
AE6
C
131 136Right-handed alpha
Helix 43
AE7
C
139 144Right-handed alpha
Helix 44
AE8
C
172 177Right-handed alpha
Helix 45
AE9
C
207 212Right-handed alpha
Helix 46
AF1
C
222 227Right-handed alpha
Helix 47
AF2
C
239 243Right-handed 310
Helix 48
AF3
C
254 262Right-handed alpha
Helix 49
AF4
C
323 334Right-handed alpha
Helix 50
AF5
C
335 350Right-handed alpha
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There are 7 sheets in PDB entry 7BSS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
208 209anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 137first strand
Strand 2
A
124 128anti-parallel
Strand 3
A
146 150anti-parallel
Strand 4
A
256 263anti-parallel
Strand 5
A
158 164anti-parallel
Strand 6
A
244 245anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 188first strand
Strand 2
A
170 173anti-parallel
Strand 3
A
251 252anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 391first strand
Strand 2
A
847 849anti-parallel
Strand 3
A
829 833parallel
Strand 4
A
811 815parallel
Strand 5
A
405 408parallel
Strand 6
A
669 673parallel
Strand 7
A
784 788parallel
Strand 8
A
747 752parallel
Strand 9
A
696 699parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 81first strand
Strand 2
C
308 314anti-parallel
Strand 3
C
118 124anti-parallel
Strand 4
C
269 276anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
104 106first strand
Strand 2
C
289 295anti-parallel
Strand 3
C
109 110anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
104 106first strand
Strand 2
C
289 295anti-parallel
Strand 3
C
185 188anti-parallel
Strand 4
C
194 196anti-parallel
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