Analysis of interatomic Contacts of Structural Units in PDB entry:
7BU0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BU0 entry

There are 4 chains in PDB entry 7BU0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 11GLU 417
B
 GLY 10VAL 416
C
 MET 1GLY 75
D
 MET 1GLY 75
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 7BU0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 40Right-handed alpha
Helix 2
AA2
A
42 53Right-handed alpha
Helix 3
AA3
A
56 68Right-handed alpha
Helix 4
AA4
A
76 83Right-handed alpha
Helix 5
AA5
A
83 107Right-handed alpha
Helix 6
AA6
A
108 110Right-handed 310
Helix 7
AA7
A
111 132Right-handed alpha
Helix 8
AA8
A
134 140Right-handed 310
Helix 9
AA9
A
146 151Right-handed alpha
Helix 10
AB1
A
152 157Right-handed 310
Helix 11
AB2
A
159 190Right-handed alpha
Helix 12
AB3
A
196 237Right-handed alpha
Helix 13
AB4
A
243 256Right-handed alpha
Helix 14
AB5
A
319 336Right-handed alpha
Helix 15
AB6
A
348 366Right-handed alpha
Helix 16
AB7
A
368 386Right-handed alpha
Helix 17
AB8
A
386 391Right-handed alpha
Helix 18
AB9
A
393 410Right-handed alpha
Helix 19
AC1
A
410 415Right-handed alpha
Helix 20
AC2
B
23 40Right-handed alpha
Helix 21
AC3
B
42 53Right-handed alpha
Helix 22
AC4
B
56 68Right-handed alpha
Helix 23
AC5
B
76 83Right-handed alpha
Helix 24
AC6
B
83 107Right-handed alpha
Helix 25
AC7
B
108 110Right-handed 310
Helix 26
AC8
B
111 132Right-handed alpha
Helix 27
AC9
B
134 140Right-handed 310
Helix 28
AD1
B
146 151Right-handed alpha
Helix 29
AD2
B
152 157Right-handed 310
Helix 30
AD3
B
159 190Right-handed alpha
Helix 31
AD4
B
196 237Right-handed alpha
Helix 32
AD5
B
244 256Right-handed alpha
Helix 33
AD6
B
319 337Right-handed alpha
Helix 34
AD7
B
349 366Right-handed alpha
Helix 35
AD8
B
368 391Right-handed alpha
Helix 36
AD9
B
393 410Right-handed alpha
Helix 37
AE1
B
410 416Right-handed alpha
Helix 38
AE2
C
22 32Right-handed alpha
Helix 39
AE3
C
37 41Right-handed 310
Helix 40
AE4
D
22 34Right-handed alpha
Helix 41
AE5
D
37 41Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 7BU0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 261first strand
Strand 2
A
267 270anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 281first strand
Strand 2
A
295 300parallel
Strand 3
A
304 308anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 16first strand
Strand 2
B
304 308anti-parallel
Strand 3
B
295 300anti-parallel
Strand 4
B
277 281parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 243first strand
Strand 2
D
74 75anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 261first strand
Strand 2
B
267 270anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
340 343first strand
Strand 2
B
346 348anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
C
2 6anti-parallel
Strand 3
C
66 69parallel
Strand 4
C
43 44anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 6anti-parallel
Strand 3
D
66 69parallel
Strand 4
D
43 44anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il