Analysis of interatomic Contacts of Structural Units in PDB entry:
7BUM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BUM entry

There are 2 chains in PDB entry 7BUM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 147LEU 507
B
 PRO 147LEU 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7BUM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
149 162Right-handed alpha
Helix 2
AA2
A
164 183Right-handed alpha
Helix 3
AA3
A
246 250Right-handed 310
Helix 4
AA4
A
258 275Right-handed alpha
Helix 5
AA5
A
319 323Right-handed 310
Helix 6
AA6
A
333 341Right-handed alpha
Helix 7
AA7
A
367 377Right-handed alpha
Helix 8
AA8
A
393 410Right-handed alpha
Helix 9
AA9
A
411 416Right-handed 310
Helix 10
AB1
A
419 434Right-handed alpha
Helix 11
AB2
A
444 463Right-handed alpha
Helix 12
AB3
A
482 495Right-handed alpha
Helix 13
AB4
A
501 505Right-handed 310
Helix 14
AB5
B
148 158Right-handed alpha
Helix 15
AB6
B
165 183Right-handed alpha
Helix 16
AB7
B
246 252Right-handed 310
Helix 17
AB8
B
258 275Right-handed alpha
Helix 18
AB9
B
319 323Right-handed 310
Helix 19
AC1
B
333 343Right-handed alpha
Helix 20
AC2
B
367 377Right-handed alpha
Helix 21
AC3
B
393 412Right-handed alpha
Helix 22
AC4
B
413 416Right-handed 310
Helix 23
AC5
B
419 434Right-handed alpha
Helix 24
AC6
B
436 443Right-handed 310
Helix 25
AC7
B
444 463Right-handed alpha
Helix 26
AC8
B
482 498Right-handed alpha
Helix 27
AC9
B
499 500Right-handed 310
Helix 28
AD1
B
501 505Right-handed 310
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There are 5 sheets in PDB entry 7BUM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 194first strand
Strand 2
A
212 219anti-parallel
Strand 3
A
306 314parallel
Strand 4
A
345 348anti-parallel
Strand 5
A
363 366anti-parallel
Strand 6
A
234 238anti-parallel
Strand 7
A
224 227anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 253first strand
Strand 2
A
256 257anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 467first strand
Strand 2
A
470 474anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 194first strand
Strand 2
B
211 219anti-parallel
Strand 3
B
304 314parallel
Strand 4
B
345 348anti-parallel
Strand 5
B
363 366anti-parallel
Strand 6
B
234 238anti-parallel
Strand 7
B
224 227anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 194first strand
Strand 2
B
211 219anti-parallel
Strand 3
B
304 314parallel
Strand 4
B
293 298anti-parallel
Strand 5
B
282 284anti-parallel
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