Analysis of interatomic Contacts of Structural Units in PDB entry:
7BUX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7BUX entry

There are 2 chains in PDB entry 7BUX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LYS 342
B
 ASP 3LYS 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 7BUX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 21Right-handed alpha
Helix 2
AA2
A
28 43Right-handed alpha
Helix 3
AA3
A
48 62Right-handed alpha
Helix 4
AA4
A
68 98Right-handed alpha
Helix 5
AA5
A
108 111Right-handed 310
Helix 6
AA6
A
116 138Right-handed alpha
Helix 7
AA7
A
142 169Right-handed alpha
Helix 8
AA8
A
179 191Right-handed alpha
Helix 9
AA9
A
191 196Right-handed alpha
Helix 10
AB1
A
196 207Right-handed alpha
Helix 11
AB2
A
210 213Right-handed 310
Helix 12
AB3
A
214 239Right-handed alpha
Helix 13
AB4
A
240 245Right-handed alpha
Helix 14
AB5
A
257 267Right-handed alpha
Helix 15
AB6
A
268 277Right-handed alpha
Helix 16
AB7
A
283 297Right-handed alpha
Helix 17
AB8
A
298 320Right-handed alpha
Helix 18
AB9
A
323 338Right-handed alpha
Helix 19
AC1
B
4 21Right-handed alpha
Helix 20
AC2
B
28 43Right-handed alpha
Helix 21
AC3
B
48 62Right-handed alpha
Helix 22
AC4
B
68 97Right-handed alpha
Helix 23
AC5
B
108 111Right-handed 310
Helix 24
AC6
B
116 138Right-handed alpha
Helix 25
AC7
B
142 169Right-handed alpha
Helix 26
AC8
B
174 178Right-handed 310
Helix 27
AC9
B
179 191Right-handed alpha
Helix 28
AD1
B
191 196Right-handed alpha
Helix 29
AD2
B
196 207Right-handed alpha
Helix 30
AD3
B
210 213Right-handed 310
Helix 31
AD4
B
214 238Right-handed alpha
Helix 32
AD5
B
257 267Right-handed alpha
Helix 33
AD6
B
268 279Right-handed alpha
Helix 34
AD7
B
283 297Right-handed alpha
Helix 35
AD8
B
298 320Right-handed alpha
Helix 36
AD9
B
323 338Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7BUX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 102first strand
Strand 2
A
105 106anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 102first strand
Strand 2
B
105 106anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il